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Report for CCDS89404.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89404.1 Public Mus musculus 19 Pprc1 23 108 98 CCDS HistoryNCBI Gene:226169Re-query CCDS DB by CCDS ID:89404.1Re-query CCDS DB by GeneID:226169See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89404.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062322.10 ENSMUSP00000079389.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062322.10Link to Ensembl Protein Viewer:ENSMUSP00000079389.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000062322Re-query CCDS DB by Protein ID:ENSMUSP00000079389
Original member Current member NCBI NM_001346801.1 NP_001333730.1 Accepted alive Link to Nucleotide Sequence:NM_001346801.1Link to Protein Sequence:NP_001333730.1Re-query CCDS DB by Nucleotide ID:NM_001346801Re-query CCDS DB by Protein ID:NP_001333730Link to BLAST:NP_001333730.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333730.1 1646 Q6NZN1-2 1646 100% 0 0

Chromosomal Locations for CCDS 89404.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46056591 46056743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46061403 46061576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46062141 46062290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46062402 46062503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46062612 46065480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46065664 46065717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46067229 46067286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46068018 46068088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46069039 46069768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46071277 46071411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46071519 46071585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46071702 46071823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46072183 46072334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46072549 46072652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4941 nt):
ATGGCGGCGCGCCGGGGACGGAGAGACCGAGTCGCGCCGCCTCCGACTGGGGGCCCGGGTCCTGACCCTG
GCGGTGGAGTGCGTGGCGGCAGTTGGGCGAGTCGAAGCCAAGCGCCGTATGGGACCGGGGGCTCCGTGAG
CGCCGCGGAGCAGGTCCATGAGGAAGGGAATGACTCTAGCTTTGTCAGTCTTTCTCGACTGGGCCCCTCT
CTGAGGGAGAAAGACCTGGAAATGGAGGAACTGATACTGCAGGATGAGACCCTCCTGGAGACCATGCAGA
GCTACATGGACGCCTCCCTTATATCCCTCATTGAGGATTTTGGAGAGCAGAGCAGATTATCTCTGGAGGA
CCAGAATGAAATGTCGCTGCTCACAGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTGTCC
CCTTTTGACACCATTCCTGATTCAGAGCTGCTCGTGTCCCCTCGGGAGAGCTCCTCTCTGCACAAGCTGC
TCAATCTCTCTCGGACACCCCCAGAACGTGACCTTATCACCCCAATTGACCCTTTGGGGCCCAGCACAGG
AAGTAGTCGGGTGAGTGGGGTTGAGGTGCCTCTTGCAGACTCTCCATGGGACTTCTCTCCGCCTCCTTTC
TTGGAAACTTCTTCCCCTAAGCTGCCTAGCTGGAGACCCTCGAGACCAAGACCTCGATGGGGTCAGTCCC
CTCCTCCTCAGCAGCGCAGTGATGGGGAAGAGGAGGAGGAGGTCGCCGGTTTCAGTGGTCAGATGCTTGC
TGGCAAACTCGACAACTCTGTGAACAATGTCCTGGACTTCCCCATGCACCTGGCATGCCCTGAGGAAGAA
GGCACAGCCGAGGGAGCAGATGCGCCAGCGTCAGCCCCTGGTGACGAGAGCATCTCCTCCTTGAGTGAGC
TGGTTCGGGCCATGCATCCCTACTGCTTGCCCAACCTCACCCACTTGGCATCCCTTGAGGGTGAACTTGA
GGGACAGGCTGATGCTGACGCTGACGAGTTGACGCTGCCTGAGGGCTGTGTTGTACTGGAGATTGTTGGC
CAGGCAGCCACAACTGGTGATGACCTCGAGATCCCAGTCGTGGTGCGGCAGATTCCTTCTGGATCCCAGT
CTGTGCTCCTGGATGAGTCTCTAGGAAGCAGTCCTGCCTTGCAGTTACTCATGCCCACCATGGAGTCCGA
GACCGAAGCTGCTGTGCCTGAAGTTGCTCCTTGCCCCGATGAAGAATTACCACTGAGCTCCGCCTGCTTA
TTGGAGCCCAGGGAAATCATGGAGTCATTGACACCCAAGGAACCTCAGAGCCTACCTGCCAGTGCAAGTC
AGGGTTCTCAGAAAGTTCCCAGAAAGGGTAGGAAGAAGAAGAACAAGGAACAGCCAACAGCCTGTGTGGA
AGCCTGTACCAGGCGGCTGAGGTCATCTTCTCGAGGACAGTCTACTGTGTCTGCAGAGGTGAACTCTCAG
GCAGGCAGTTCACAGAAACAGCCCCAGGAAGAGCTTCAGAGAGAGGCTGCTGCCCTTCAGAGCAGAGGGA
AGCCACGGGCTTGGGCTCGGGCCTGGGCAGCTGCCTTAGAGAAGACAGGGTCCGAGAATTTAGAGAGAAG
TGCGGGACAGGATAGTCCTGCTGAAGAAGACGCACTGGATCTCTGTCCTAAGCTGCTTGAGACCAGCCAA
GCCAACCCCACTCTCTCATTAAATGACTCTGCTCAAGCTGACTCCATGCCTGTTGACTCTGTTGAAGGTG
ATTCCCCTGCAGTTGGCAATGCTGCACCTGGTGATCAGGCTTCATCTGGTACAGAGCTGGTTGGTTCTCT
CCCAGTAGGCCCAAACCTGACTAGCCCAGTCCTGGCTGACAAGAAAGGAATTGAACCTGCAGTGGCTATT
CCCACTTCGGATAACTTGTCTCCAGCTGATGTCCTAGCAAACACAGTGGCAGCTGACCCTGTTCCAAATG
ACCCTGCTCCAGCAGATCCTGTGCTAGTTAAGTGCAGACCCACTGATCCTAGGCGTGCTGCAGCAGCAGC
AGCAGCAGCAGCTCAGGGGAGTCGTCCTTCCCTACAGTCCGCAGACCATCCTAAGGTCGTCAGCCCTGAA
GGCAAGGATGTTGTAGGTCCTCTGAAGGTGGAAGGTAGTACCAGCGCTACAACCCAGGAAGCCAAACCTC
GGCCTCTCAGCCTATCTGAGTACCGTCAGCGAAGGCAGCAACGGCAAACGGAAGCAGAAGACAGGAATTC
TCAGCCCCCAGTTGTTGGCAAGTGGCCTAGTCTCCCAGAGACCCCCACAGAACTGGCAGATATCCCTTGC
CTTGTTCCATCAGCCCCAGCCAGGAAGACAGCTCCACAGAGAAGCCCTATAGCTGTACCAGAGACTGTGT
CTGTGGGTTCTAATCCTGTTTCCCCTACTCCTGAGCCATCTGCAAGCAAACTTATGGTTTCAACTCACTC
TGAACAGGTGTCATCTCATGAGATGCCACTTGCAGTTAGACCACCCCCTCCTCCTTTGCCGTCTGTGTCT
CCTGCTGGACCCATCCCGTCCACGGTGCCCGCTCCTTTGCCTCCTTTCCCTCCGAGTGTACCGCCTTTGC
TTCCTCTTCCTTCAGGTGGCCATGGAGTCCCCCGCCTGCCCCCACCTCCTTTGCAACCTCCTGGACTTCC
AGTATCAATGAGACAAATGCCACCTGACCCCTATACTCAGTATGCCCCTGTGCCACCCTGGTCTTGTTAC
CCCTCTGTGTCCCCTCCGGGCTATTCTTGTTTGCCCCCACCACCAACGATGCCCATAGTATCTGGTACTC
CTGGTACCTATGCTGTGCCCCCAACTTGCAATGTGCCTTGGGTACCCCCTCCTGCACCAGTTTCACCTTA
CAGCTCCAGCTGTGCCTATGGATCCCTTGGGTGGGGCCCAGGGCTGCAACAGCCTCCCTTTTGGTCTACT
GTTTCTCCACCTCCGTTGTCTTCAGTCCCTACTGGAAGAGCTGTTCCCCCGACCCCCGTGGAACCCAGTG
GTGATCCCGCTGGTCCTCCTGAAGATGTGCTTCCTGGGCCAGTGACTCCTTCCCTAAGCTCCGGGCCGGC
CAGCCCCGCAGCTCCACCAGTAGAACCTACAAAGCCGGAGGCTCAGCCAGTGCCTGTATCTCCCCAGCCG
AAACACAAAGTGTCCACCTTGGTACAGAGTCCCCAGATCAAGGCTCCACCGACTTTGTCTACTGAGGGTG
TAGTTTTTGAGGAGTCTGTATCAGAGAGGCTAAAGTCTGAGACCCAGGAGAACAGACCAAAGGAGAAGCC
CATCTCTACAGCTATCAAGTCTGTCCCTGTGCCAAAGCAGAGCGCTGTTGCAAAGCTACCTGCTGTCCAT
CCAGCCCGTCTAAGGAAGCTGTCCTTCCTGCCCACCCCACGTGCTCAGGGTCCTGAGGATGTGGTGCAGG
CGTTCATCAGTGAGATTGGGATCGAAGCATCAGATCTGTCGAGTCTGTTGGAGCAGTTTGAGAAGTCAGA
AGCCAAAAAGGAGTGTCCTCTCCCGGCTTCTGCTGACAGCTTGGCTGTAGGAAACTCAGGCAGCATTGAC
ATTCCCCAGGAGAAGAAGCCCTTAGACCGGTTACAAGCCCCAGAACTGGCCAACGTGGCAGGGCTCACCC
CTCCAGCTACCCCTCCCCACCAGTTATGGAAACCCCTGGCTGCTGTCTCACTCTTGGCGAAAGCCAAATC
TCCTAAATCCACCGCCCAAGAGGGAACCCTGAAGCCTGAAGGAATTACAGAGGCCAAACCTCCAGCTACA
GCCTGCCTCCAAGAAGGGGCCCACAGCCCTAGTCCAGTCCATGTGGGCTCTGGGGACCATGACTATTGTG
TCCGAAGCAGGACACCCCCAAAAAGGATGCCTGCCCTAGTCATCTCAGAGGTGGGCTCCCGATGGAATGT
CAAGCGCCATCAGGACATCACCATCAAGCCTGTGTTGTCATTGGGCTCAGCTGCACCCCCACTCCCATGC
ACGGCTACTTCCCAGGAGCCTCTTGATCACAGGACTAGCGTTGAGCAGGCAGATCCTTCAGCGCCTTGTT
TTGCCCCATCCACCTTGCTGTCTCCTGAGGCTTCACCCTGCCGGAGTGAAATGAACGCTAGGACTCCCCC
TGAGCCCTCAGACAAGCAGCAGTCAATGCGCTGTTACCGAAAAGCCTGCAGATCAGTCAGCCCCTCAAGT
AGGGGCTGGCAAGGCCGCCGTGGCCGCAGTAGCCGTTCTGTCAGCTCTGGGTCCAGCCGGACCAGTGAAG
CGTCCTCGTCCTCATCGGTGTCTTCCTCATCCCGATCCCGGTCCCGGTCCAGGTCCAGGTCCTTCTCCCC
CCCCAACAAGAGGTGGCGAAGGTCCAGCTGCAGTTCCTCTGGACGGTCCAGAAGGTGTTCATCCTCCTCC
TCCTCCTCCTCTTCCTCCTCATCGTGCAGTTCCAGAAGCCGGTCTCCCTCTGTGTCCCCTTGCAGGAGAA
GTGACCGGAGGCGGCGGTACAGCTCTTACCGTGCAAATGACCATTACCAAAGGCAGAGAGTGCTACAGAA
GGAGCGTGCAATAGAAGAGAGAAGGGTGGTCTTCATTGGGAAAATACCTGGCCGAATGACTCGGTCGGAG
CTGAAACAGAGGTTCTCTGTTTTTGGAGAAATTGAGGAGTGTACCATTCATTTTCGTGTCCAAGGTGACA
ACTATGGTTTCGTCACTTACCGTTATGCTGAAGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCG
GCAGGCAGACGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCAGTTCTGCAAGAGGAGTTACTCT
GACCTTGACTCCAATCGGGAAGACTTTGATCCTGCTCCTGTAAAGAGCAAATTCGATTCACTTGACTTTG
ATACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAA

Translation (1646 aa):
MAARRGRRDRVAPPPTGGPGPDPGGGVRGGSWASRSQAPYGTGGSVSAAEQVHEEGNDSSFVSLSRLGPS
LREKDLEMEELILQDETLLETMQSYMDASLISLIEDFGEQSRLSLEDQNEMSLLTALTEILDNADSENLS
PFDTIPDSELLVSPRESSSLHKLLNLSRTPPERDLITPIDPLGPSTGSSRVSGVEVPLADSPWDFSPPPF
LETSSPKLPSWRPSRPRPRWGQSPPPQQRSDGEEEEEVAGFSGQMLAGKLDNSVNNVLDFPMHLACPEEE
GTAEGADAPASAPGDESISSLSELVRAMHPYCLPNLTHLASLEGELEGQADADADELTLPEGCVVLEIVG
QAATTGDDLEIPVVVRQIPSGSQSVLLDESLGSSPALQLLMPTMESETEAAVPEVAPCPDEELPLSSACL
LEPREIMESLTPKEPQSLPASASQGSQKVPRKGRKKKNKEQPTACVEACTRRLRSSSRGQSTVSAEVNSQ
AGSSQKQPQEELQREAAALQSRGKPRAWARAWAAALEKTGSENLERSAGQDSPAEEDALDLCPKLLETSQ
ANPTLSLNDSAQADSMPVDSVEGDSPAVGNAAPGDQASSGTELVGSLPVGPNLTSPVLADKKGIEPAVAI
PTSDNLSPADVLANTVAADPVPNDPAPADPVLVKCRPTDPRRAAAAAAAAAQGSRPSLQSADHPKVVSPE
GKDVVGPLKVEGSTSATTQEAKPRPLSLSEYRQRRQQRQTEAEDRNSQPPVVGKWPSLPETPTELADIPC
LVPSAPARKTAPQRSPIAVPETVSVGSNPVSPTPEPSASKLMVSTHSEQVSSHEMPLAVRPPPPPLPSVS
PAGPIPSTVPAPLPPFPPSVPPLLPLPSGGHGVPRLPPPPLQPPGLPVSMRQMPPDPYTQYAPVPPWSCY
PSVSPPGYSCLPPPPTMPIVSGTPGTYAVPPTCNVPWVPPPAPVSPYSSSCAYGSLGWGPGLQQPPFWST
VSPPPLSSVPTGRAVPPTPVEPSGDPAGPPEDVLPGPVTPSLSSGPASPAAPPVEPTKPEAQPVPVSPQP
KHKVSTLVQSPQIKAPPTLSTEGVVFEESVSERLKSETQENRPKEKPISTAIKSVPVPKQSAVAKLPAVH
PARLRKLSFLPTPRAQGPEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPLPASADSLAVGNSGSID
IPQEKKPLDRLQAPELANVAGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGTLKPEGITEAKPPAT
ACLQEGAHSPSPVHVGSGDHDYCVRSRTPPKRMPALVISEVGSRWNVKRHQDITIKPVLSLGSAAPPLPC
TATSQEPLDHRTSVEQADPSAPCFAPSTLLSPEASPCRSEMNARTPPEPSDKQQSMRCYRKACRSVSPSS
RGWQGRRGRSSRSVSSGSSRTSEASSSSSVSSSSRSRSRSRSRSFSPPNKRWRRSSCSSSGRSRRCSSSS
SSSSSSSSCSSRSRSPSVSPCRRSDRRRRYSSYRANDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSE
LKQRFSVFGEIEECTIHFRVQGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYS
DLDSNREDFDPAPVKSKFDSLDFDTLLKQAQKNLRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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