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Report for CCDS82346.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82346.1 Public Homo sapiens 19 CATSPERG 24 110 108 CCDS HistoryNCBI Gene:57828Re-query CCDS DB by CCDS ID:82346.1Re-query CCDS DB by GeneID:57828See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82346.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410018.5 ENSP00000387057.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410018.5Link to Ensembl Protein Viewer:ENSP00000387057.1Re-query CCDS DB by Nucleotide ID:ENST00000410018Re-query CCDS DB by Protein ID:ENSP00000387057
Original member Current member NCBI NM_001330496.2 NP_001317425.1 Accepted alive Link to Nucleotide Sequence:NM_001330496.2Link to Protein Sequence:NP_001317425.1Re-query CCDS DB by Nucleotide ID:NM_001330496Re-query CCDS DB by Protein ID:NP_001317425Link to BLAST:NP_001317425.1

Chromosomal Locations for CCDS 82346.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38337235 38337504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38337593 38337646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38343580 38343724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38343993 38344119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38344296 38344368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38346450 38346605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38352261 38352432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38354710 38354847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38356484 38356543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38358278 38358328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38358432 38358561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38359470 38359581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38360489 38360647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38360731 38360843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38361648 38361861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362210 38362272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362376 38362574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38362714 38362832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38364891 38364971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38365061 38365117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367156 38367312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367509 38367572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38367681 38367776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38368048 38368137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38369972 38370064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38370159 38370258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38370526 38370792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3360 nt):
ATGTGCGGCCCAGCCATGTTCCCTGCCGGTCCTCCGTGGCCCAGAGTCCGAGTCGTGCAGGTGCTGTGGG
CCCTGCTGGCAGTGCTCCTGGCGTCGTGGAGGCTGTGGGCGATCAAGGATTTCCAGGAATGCACCTGGCA
GGTTGTCCTGAACGAGTTTAAGAGGGTAGGCGAGAGTGGTGTGAGCGACAGCTTCTTTGAGCAAGAGCCC
GTGGACACAGTGAGCAGCTTGTTTCACATGCTGGTGGACTCACCCATCGACCCGAGCGAGAAATACCTGG
GCTTCCCTTACTACCTGAAGATCAACTACTCCTGCGAGGAAAAGCCCTCTGAGGACCTGGTGCGCATGGG
CCACCTGACGGGGCTAAAGCCCCTGGTGCTGGTCACCTTCCAGTCCCCAGTCAACTTCTACCGCTGGAAG
ATAGAGCAGCTGCAGATCCAGATGGAGGCTGCCCCCTTCCGCAGCAAAGAGCCATGCATGGCAGAAGAAG
TGTGTAGCATGAGCTGGTACACGCCCATGCCCATCAAGAAAGGCAGTGTGGTCATGCGTGTGGACATCAG
CAGCAATGGCCTGGGGACCTTCATTCCAGATAAAAGGTTCCAGATGAATATCAACGGCTTCCTGAAGAGA
GACCGGGACAATAACATCCAATTCACTGTGGGAGAGGAGCTCTTCAACCTGATGCCCCAGTACTTTGTGG
GTGTCTCATCGAGGCCCTTGTGGCACACTGTGGACCAGTCACCTGTGCTTATCCTGGGAGGCATTCCCAA
TGAGAAGTACGTCCTGATGACTGACACCAGCTTCAAGGACTTCTCTCTCGTGGAGCTGAGCATTGACAGT
TGCTGGGTGGGCTCCTTCTACTGCCCCCATTCTGGCTTCACAGCCACCATCTATGACACTATTGCCACCG
AGAGCACCCTCTTCATTCGGCAGAACCAGCTGGTCTACTATTTTACAGGCACCTATACCACACTCTATGA
GAGAAACCGCGGCAGTGGCAGTTGGATTCGTGTCCTGGCCAGCGAGTGCATCAAGAAGCTGTGCCCTGTG
TATTTCCATAGCAATGGCTCTGAGTACATAATGGCCCTCACCACGGGCAAGCATGAGGGTTATGTACACT
TCGGGACCATCAGAGATGGCCAGGTGTCCTTTGAGATGCTGCCCAGGCAGTGGTCTGTGTGCGAGCAGAT
AGGAGCTAGTGATGACCTGGAACTTCTCTACCACATCCCAGAATTCATCCCTGAAGCTCGAGGATTGGAG
TTCCTGATGATCCTAGGGACAGAGTCCTACACCAGCACTGCAATGGCCCCCAAGGGCATCTTCTGTAACC
CGTACAACAATCTGATCTTCATCTGGGGCAACTTCCTCCTGCAGAGCTCTAACAAGGAAAACTTCATCTA
CCTGGCAGACTTCCCCAAGGAACTGTCCATCAAATACATGGCCAGATCGTTCCGTGGGGCTGTGGCTATT
GTCACAGAGACGGAGGAGATCTGGTACCTCCTGGAGGGCAGCTACCGGGTCTACCAGCTGTTCCCTTCCA
AGGGCTGGCAGGTGCACATCAGCTTAAAGCTGATGCAACAGTCCTCTCTCTACGCATCCAATGAGACCAT
GCTGACCCTCTTCTACGAAGACAGCAAACTGTACCAGCTGGTGTACCTTATGAACAACCAGAAGGGCCAG
CTGGTCAAGAGGCTCGTGCCCGTGGAGCAGCTTCTGATGTATCAACAGCACACCAGCCACTATGACTTGG
AGCGGAAAGGGGGCTACTTGATGCTCTCCTTCATCGACTTCTGCCCCTTCTCGGTGATGCGCCTGCGGAG
CCTGCCCAGTCCGCAGAGATACACGCGCCAGGAGCGCTACCGGGCGCGGCCGCCGCGCGTCCTGGAGCGC
TCGGGCTTCCACAACGAGAACTCGCTCGCCATCTACCAGGGCCTGGTCTACTACCTGCTGTGGCTGCACT
CCGTGTACGACAAGCCGTACGCGGACCCGGTGCACGACCCCACCTGGCGCTGGTGGGCGAACAACAAACA
AGACCAGGATTACTACTTCTTCTTGGCGAGCAATTGGCGAAGCGCGGGCGGCGTGTCCATAGAAATGGAC
AGCTACGAAAAGATCTACAACCTCGAGTCCGCGTACGAGCTGCCGGAGCGCATTTTCCTGGACAAGGGCA
CTGAGTACAGCTTCGCCATCTTCCTGTCGGCGCAGGGCCACTCGTTCCGGACGCAGTCAGAACTCGGCAC
CGCCTTCCAGCTGCATAGCCAGGTGGACGTGGGCGTGGTGCTGGCCGACCCCGGCTGCATCGAGGCCTCG
GTGAAGCAGGAGGTCCTGATTAATCGCAACTCGGTGCTATTTTCGATTACGCTCAAGGATAAAAAGCTTT
GCTATGACCAAGGCATTAGTGGACATCACCTTATGGAGACTTCCATGACGGTCAATGTGGTGGGTTCATC
CGGGCTCTGCTTCCAGGAAACACACCTGGGGCCCCATATGCAAGGCAACCTGATGGTGCCAGTGTTCATT
GGCTGCCCCCCAGGCAAGCGCCTGGCCTTCGACATCACCTACACGCTGGAATACAGCCGCCTGAAGAACA
AACACTACTTTGACTGCGTTAACGTGAACCCGGAGATGCCCTGCTTTCTCTTCCGGGACATTTTCTACCC
CTTCTTCTTGATTCAAGATTTGGTGACAGGAGACTCCGGCAGTTTCCAGGGCAGCTATGTTCTGCTGGTG
GTGGGTGGCGGGCCCACACTGGACAGCCTCAAGGACTACAGTGAGGACGAAATCTACCGCTTCAACAGCC
CCCTGGACAAGACCAACAGCCTTATCTGGACCACGAGGACCACAAGGACCACCAAAGACTCAGCCTTTCA
CATCATGTCCCACGAGAGCCCAGGCATCGAGTGGCTCTGTCTGGAGAATGCCCCATGCTATGACAATGTT
CCCCAAGGCATCTTTGCCCCTGAATTCTTCTTCAAGGTGTTGGTGAGCAATAGAGGAGTGGACACGAGCA
CCTACTGCAACTACCAGCTCACCTTCCTGCTGCACATCCACGGGCTGCCACTCAGTCCCAAGCGGGCCCT
TTTCATCATCATGGTGTCAGCTAGCGTGTTTGTGGGCCTGGTGATCTTCTACATCGCCTTCTGCCTCCTG
TGGCCCCTCGTGGTGAAGGGCTGCACGATGATCCGGTGGAAGATAAACAACCTCATTGCCTCAGAATCCT
ACTACACCTACGCCTCCATTTCCGGAATCTCGAGCATGCCGTCTCTGAGACATTCCAGGATGGGCTCCAT
GTTCAGCTCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACAGTTGATGACCTGA

Translation (1119 aa):
MCGPAMFPAGPPWPRVRVVQVLWALLAVLLASWRLWAIKDFQECTWQVVLNEFKRVGESGVSDSFFEQEP
VDTVSSLFHMLVDSPIDPSEKYLGFPYYLKINYSCEEKPSEDLVRMGHLTGLKPLVLVTFQSPVNFYRWK
IEQLQIQMEAAPFRSKEPCMAEEVCSMSWYTPMPIKKGSVVMRVDISSNGLGTFIPDKRFQMNINGFLKR
DRDNNIQFTVGEELFNLMPQYFVGVSSRPLWHTVDQSPVLILGGIPNEKYVLMTDTSFKDFSLVELSIDS
CWVGSFYCPHSGFTATIYDTIATESTLFIRQNQLVYYFTGTYTTLYERNRGSGSWIRVLASECIKKLCPV
YFHSNGSEYIMALTTGKHEGYVHFGTIRDGQVSFEMLPRQWSVCEQIGASDDLELLYHIPEFIPEARGLE
FLMILGTESYTSTAMAPKGIFCNPYNNLIFIWGNFLLQSSNKENFIYLADFPKELSIKYMARSFRGAVAI
VTETEEIWYLLEGSYRVYQLFPSKGWQVHISLKLMQQSSLYASNETMLTLFYEDSKLYQLVYLMNNQKGQ
LVKRLVPVEQLLMYQQHTSHYDLERKGGYLMLSFIDFCPFSVMRLRSLPSPQRYTRQERYRARPPRVLER
SGFHNENSLAIYQGLVYYLLWLHSVYDKPYADPVHDPTWRWWANNKQDQDYYFFLASNWRSAGGVSIEMD
SYEKIYNLESAYELPERIFLDKGTEYSFAIFLSAQGHSFRTQSELGTAFQLHSQVDVGVVLADPGCIEAS
VKQEVLINRNSVLFSITLKDKKLCYDQGISGHHLMETSMTVNVVGSSGLCFQETHLGPHMQGNLMVPVFI
GCPPGKRLAFDITYTLEYSRLKNKHYFDCVNVNPEMPCFLFRDIFYPFFLIQDLVTGDSGSFQGSYVLLV
VGGGPTLDSLKDYSEDEIYRFNSPLDKTNSLIWTTRTTRTTKDSAFHIMSHESPGIEWLCLENAPCYDNV
PQGIFAPEFFFKVLVSNRGVDTSTYCNYQLTFLLHIHGLPLSPKRALFIIMVSASVFVGLVIFYIAFCLL
WPLVVKGCTMIRWKINNLIASESYYTYASISGISSMPSLRHSRMGSMFSSRMTEDRAEPKEAVERQLMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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