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Report for CCDS32191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32191.1 Public Homo sapiens 15 LPCAT4 24 110 108 CCDS HistoryNCBI Gene:254531Re-query CCDS DB by CCDS ID:32191.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32191.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314891.11 ENSP00000317300.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314891.11Link to Ensembl Protein Viewer:ENSP00000317300.6Re-query CCDS DB by Nucleotide ID:ENST00000314891Re-query CCDS DB by Protein ID:ENSP00000317300
Original member Current member NCBI NM_153613.3 NP_705841.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153613.3Link to Protein Sequence:NP_705841.2Re-query CCDS DB by Nucleotide ID:NM_153613Re-query CCDS DB by Protein ID:NP_705841Link to BLAST:NP_705841.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705841.2 524 Q643R3 524 100% 0 0

Chromosomal Locations for CCDS 32191.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34359127 34359302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34359589 34359745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34360111 34360209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34361400 34361532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362196 34362321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362573 34362655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34362782 34362836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34363422 34363456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34363661 34363719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34364013 34364073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34364194 34364306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34365008 34365228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34365559 34365701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34366987 34367100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGAGCCAGGGAAGTCCGGGGGACTGGGCCCCCCTAGATCCCACCCCCGGACCCCCAGCATCCCCCAACC
CC
TTCGTGCATGAGTTACATCTCTCTCGCCTCCAGAGGGTTAAGTTCTGCCTCCTGGGGGCATTGCTGGC
C
CCCATCCGAGTGCTTCTGGCCTTTATCGTCCTCTTTCTCCTCTGGCCCTTTGCCTGGCTTCAAGTGGCC
GGT
CTTAGTGAGGAGCAGCTTCAGGAGCCAATTACAGGATGGAGGAAGACTGTGTGCCACAACGGGGTGC
TA
GGCCTGAGCCGCCTGCTGTTTTTCCTGCTGGGCTTCCTCCGGATTCGCGTTCGTGGCCAGCGAGCCTC
T
CGCCTTCAAGCCCCTGTCCTTGTTGCTGCCCCACACTCCACTTTCTTTGACCCCATTGTTCTGCTGCCC
TGT
GACCTGCCCAAAGTTGTGTCCCGAGCTGAGAACCTTTCCGTTCCTGTCATTGGAGCCCTTCTTCGAT
TC
AACCAAGCCATCCTGGTATCCCGGCATGACCCGGCTTCTCGACGCAGAGTGGTGGAGGAGGTCCGAAG
G
CGGGCCACCTCAGGAGGCAAGTGGCCGCAGGTGCTATTCTTTCCTGAGGGCACCTGTTCCAACAAGAAG
GCT
TTGCTTAAGTTCAAACCAGGAGCCTTCATCGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACC
CC
AACAGTCTGGACACCACCAGCTGGGCATGGAGGGGTCCTGGAGTACTCAAAGTCCTCTGGCTCACAGC
C
TCTCAGCCCTGCAGCATTGTGGATGTGGAGTTCCTTCCTGTGTATCACCCCAGCCCTGAGGAGAGCAGG
GAC
CCCACCCTCTATGCCAACAATGTTCAGAGGGTCATGGCACAGGCTCTGGGCATTCCAGCCACCGAAT
GT
GAGTTTGTAGGGAGCTTACCTGTGATTGTGGTGGGCCGGCTGAAGGTGGCGTTGGAACCACAGCTCTG
G
GAACTGGGAAAAGTGCTTCGGAAGGCTGGGCTGTCCGCTGGCTATGTGGACGCTGGGGCAGAGCCAGGC
CGG
AGTCGAATGATCAGCCAGGAAGAGTTTGCCAGGCAGCTACAGCTCTCTGATCCTCAGACGGTGGCTG
GT
GCCTTTGGCTACTTCCAGCAGGATACCAAGGGTTTGGTGGACTTCCGAGATGTGGCCCTTGCACTAGC
A
GCTCTGGATGGGGGCAGGAGCCTGGAAGAGCTAACTCGTCTGGCCTTTGAGCTCTTTGCTGAAGAGCAA
GCA
GAGGGTCCCAACCGCCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGCTGCTGGGTTCAC
CC
CACCCTGCTGCCACAGCTTTGCATGCTGAGCTGTGCCAGGCAGGATCCAGCCAAGGCCTCTCCCTCTG
T
CAGTTCCAGAACTTCTCCCTCCATGACCCACTCTATGGGAAACTCTTCAGCACCTACCTGCGCCCCCCA
CAC
ACCTCTCGAGGCACCTCCCAGACACCAAATGCCTCATCCCCAGGCAACCCCACTGCTCTGGCCAATG
GG
ACTGTGCAAGCACCCAAGCAGAAGGGAGACTGA


Translation (524 aa):
MSQGSPGDWAPLDPTPGPPASPNPFVHELHLSRLQRVKFCLLGALLAPIRVLLAFIVLFLLWPFAWLQVA
G
LSEEQLQEPITGWR
KTVCHNGVLGLSRLLFFLLGFLRIRVRGQRASRLQAPVLVAAPHSTFFDPIVLLP
C
DLPKVVSRAENLSVPVIG
ALLRFNQAILVSRHDPASRRRVVEEVRRRATSGGKWPQVLFFPEGTCSNKK
A
LLKFKP
GAFIAGVPVQPVLIRYPNSLDTTSWAWRGPGVLKVLWLTASQPCSIVDVEFLPVYHPSPEESR
D
PTLYANNVQRVMA
QALGIPATECEFVGSLPVIVVGRLKVALEPQLWELGKVLRKAGLSAGYVDAGAEPG
R
SRMISQEEFARQLQLSDPQTVAGAFGYFQQ
DTKGLVDFRDVALALAALDGGRSLEELTRLAFELFAEEQ
A
EGPNRLLYKDGFSTILHLLLGSPHPAATALHAELCQAGSSQGLSL
CQFQNFSLHDPLYGKLFSTYLRPP
H
TSRGTSQTPNASSPGNPTALANGTVQAPKQKGD




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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