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Report for CCDS9064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9064.1 Public Homo sapiens 12 TMPO 24 110 108 CCDS HistoryNCBI Gene:7112Re-query CCDS DB by CCDS ID:9064.1Re-query CCDS DB by GeneID:7112See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9064.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266732.8 ENSP00000266732.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000266732.8Link to Ensembl Protein Viewer:ENSP00000266732.4Re-query CCDS DB by Nucleotide ID:ENST00000266732Re-query CCDS DB by Protein ID:ENSP00000266732
Original member Current member NCBI NM_003276.2 NP_003267.1 Accepted alive Link to Nucleotide Sequence:NM_003276.2Link to Protein Sequence:NP_003267.1Re-query CCDS DB by Nucleotide ID:NM_003276Re-query CCDS DB by Protein ID:NP_003267Link to BLAST:NP_003267.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003267.1 694 P42166-1 694 100% 0 0

Chromosomal Locations for CCDS 9064.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 98515868 98516146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98527886 98528012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98531680 98531838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 98532823 98534342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGCCGGAGTTCCTGGAAGACCCCTCGGTCCTGACAAAAGACAAGTTGAAGAGTGAGTTGGTCGCCAACA
ATGTGACGCTGCCGGCCGGGGAGCAGCGCAAAGACGTGTACGTCCAGCTCTACCTGCAGCACCTCACGGC
TCGCAACCGGCCGCCGCTCCCCGCCGGCACCAACAGCAAGGGGCCCCCGGACTTCTCCAGTGACGAAGAG
CGCGAGCCCACCCCGGTCCTCGGCTCTGGGGCCGCCGCCGCGGGCCGGAGCCGAGCAGCCGTCGGCAGGA
AAGCCACAAAAAAAACTGATAAACCCAGACAAGAAGATAAAGATGATCTAGATGTAACAGAGCTCACTAA
TGAAGATCTTTTGGATCAGCTTGTGAAATACGGAGTGAATCCTGGTCCTATTGTGGGAACAACCAGGAAG
CTATATGAGAAAAAGCTTTTGAAACTGAGGGAACAAGGAACAGAATCAAGATCTTCTACTCCTCTGCCAA
CAATTTCTTCTTCAGCAGAAAATACAAGGCAGAATGGAAGTAATGATTCTGACAGATACAGTGACAATGA
AGAAGGAAAGAAGAAAGAACACAAGAAAGTGAAGTCCACTAGGGATATTGTTCCTTTTTCTGAACTTGGA
ACTACTCCCTCTGGTGGTGGATTTTTTCAGGGTATTTCTTTTCCTGAAATCTCCACCCGTCCTCCTTTGG
GCAGTACCGAACTACAGGCAGCTAAGAAAGTACATACTTCTAAGGGAGACCTACCTAGGGAGCCTCTTGT
TGCCACAAACTTGCCTGGCAGGGGACAGTTGCAGAAGTTAGCCTCTGAAAGGAATTTGTTTATTTCATGC
AAGTCTAGCCATGATAGGTGTTTAGAGAAAAGTTCTTCGTCATCTTCTCAGCCTGAACACAGTGCCATGT
TGGTCTCTACTGCAGCTTCTCCTTCACTGATTAAAGAAACCACCACTGGTTACTATAAAGACATAGTAGA
AAATATTTGCGGTAGAGAGAAAAGTGGAATTCAACCATTATGTCCTGAGAGGTCCCATATTTCAGATCAA
TCGCCTCTCTCCAGTAAAAGGAAAGCACTAGAAGAGTCTGAGAGCTCACAACTAATTTCTCCGCCACTTG
CCCAGGCAATCAGAGATTATGTCAATTCTCTGTTGGTCCAGGGTGGGGTAGGTAGTTTGCCTGGAACTTC
TAACTCTATGCCCCCACTGGATGTAGAAAACATACAGAAGAGAATTGATCAGTCTAAGTTTCAAGAAACT
GAATTCCTGTCTCCTCCAAGAAAAGTCCCTAGACTGAGTGAGAAGTCAGTGGAGGAAAGGGATTCAGGTT
CCTTTGTGGCATTTCAGAACATACCTGGATCCGAACTGATGTCTTCTTTTGCCAAAACTGTTGTCTCTCA
TTCACTCACTACCTTAGGTCTAGAAGTGGCTAAGCAATCACAGCATGATAAAATAGATGCCTCAGAACTA
TCTTTTCCCTTCCATGAATCTATTTTAAAAGTAATTGAAGAAGAATGGCAGCAAGTTGACAGGCAGCTGC
CTTCACTGGCATGCAAATATCCAGTTTCTTCCAGGGAGGCAACACAGATATTATCAGTTCCAAAAGTAGA
TGATGAAATCCTAGGGTTTATTTCTGAAGCCACTCCACTAGGAGGTATTCAAGCAGCCTCCACTGAGTCT
TGCAATCAGCAGTTGGACTTAGCACTCTGTAGAGCATATGAAGCTGCAGCATCAGCATTGCAGATTGCAA
CTCACACTGCCTTTGTAGCTAAGGCTATGCAGGCAGACATTAGTCAAGCTGCACAGATTCTTAGCTCAGA
TCCTAGTCGTACCCACCAAGCGCTTGGGATTCTGAGCAAAACATATGATGCAGCCTCATATATTTGTGAA
GCTGCATTTGATGAAGTGAAGATGGCTGCCCATACCATGGGAAATGCCACTGTAGGTCGTCGATACCTCT
GGCTGAAGGATTGCAAAATTAATTTAGCTTCTAAGAATAAGCTGGCTTCCACTCCCTTTAAAGGTGGAAC
ATTATTTGGAGGAGAAGTATGCAAAGTAATTAAAAAGCGTGGAAATAAACACTAG

Translation (694 aa):
MPEFLEDPSVLTKDKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPPLPAGTNSKGPPDFSSDEE
REPTPVLGSGAAAAGRSRAAVGRKATKKTDKPRQEDKDDLDVTELTNEDLLDQLVKYGVNPGPIVGTTRK
LYEKKLLKLREQGTESRSSTPLPTISSSAENTRQNGSNDSDRYSDNEEGKKKEHKKVKSTRDIVPFSELG
TTPSGGGFFQGISFPEISTRPPLGSTELQAAKKVHTSKGDLPREPLVATNLPGRGQLQKLASERNLFISC
KSSHDRCLEKSSSSSSQPEHSAMLVSTAASPSLIKETTTGYYKDIVENICGREKSGIQPLCPERSHISDQ
SPLSSKRKALEESESSQLISPPLAQAIRDYVNSLLVQGGVGSLPGTSNSMPPLDVENIQKRIDQSKFQET
EFLSPPRKVPRLSEKSVEERDSGSFVAFQNIPGSELMSSFAKTVVSHSLTTLGLEVAKQSQHDKIDASEL
SFPFHESILKVIEEEWQQVDRQLPSLACKYPVSSREATQILSVPKVDDEILGFISEATPLGGIQAASTES
CNQQLDLALCRAYEAAASALQIATHTAFVAKAMQADISQAAQILSSDPSRTHQALGILSKTYDAASYICE
AAFDEVKMAAHTMGNATVGRRYLWLKDCKINLASKNKLASTPFKGGTLFGGEVCKVIKKRGNKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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