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Report for CCDS2795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2795.1 Public Homo sapiens 3 RHOA 24 110 108 CCDS HistoryNCBI Gene:387Re-query CCDS DB by CCDS ID:2795.1Re-query CCDS DB by GeneID:387See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000418115.6 ENSP00000400175.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000418115.6Link to Ensembl Protein Viewer:ENSP00000400175.1Re-query CCDS DB by Nucleotide ID:ENST00000418115Re-query CCDS DB by Protein ID:ENSP00000400175
Original member Current member EBI ENST00000445425.6 ENSP00000408402.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000445425.6Link to Ensembl Protein Viewer:ENSP00000408402.3Re-query CCDS DB by Nucleotide ID:ENST00000445425Re-query CCDS DB by Protein ID:ENSP00000408402
Original member Current member EBI ENST00000679208.1 ENSP00000503282.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000679208.1Link to Ensembl Protein Viewer:ENSP00000503282.1Re-query CCDS DB by Nucleotide ID:ENST00000679208Re-query CCDS DB by Protein ID:ENSP00000503282
Original member Current member EBI ENST00000678200.1 ENSP00000504180.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678200.1Link to Ensembl Protein Viewer:ENSP00000504180.1Re-query CCDS DB by Nucleotide ID:ENST00000678200Re-query CCDS DB by Protein ID:ENSP00000504180
Original member Current member NCBI NM_001313941.2 NP_001300870.1 Accepted alive Link to Nucleotide Sequence:NM_001313941.2Link to Protein Sequence:NP_001300870.1Re-query CCDS DB by Nucleotide ID:NM_001313941Re-query CCDS DB by Protein ID:NP_001300870Link to BLAST:NP_001300870.1
Original member Current member NCBI NM_001664.4 NP_001655.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001664.4Link to Protein Sequence:NP_001655.1Re-query CCDS DB by Nucleotide ID:NM_001664Re-query CCDS DB by Protein ID:NP_001655Link to BLAST:NP_001655.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001300870.1 193 P61586 193 100% 0 0
NP_001655.1 193 P61586 193 100% 0 0

Chromosomal Locations for CCDS 2795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49360209 49360382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49362496 49362626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49368428 49368548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49375434 49375589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCTGTGGAAAGACATGCTTGCTCATAG
TCTTCAGCAAGGACCAGTTCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACTATGTGGCAGATATCGA
GGTGGATGGAAAGCAGGTAGAGTTGGCTTTGTGGGACACAGCTGGGCAGGAAGATTATGATCGCCTGAGG
CCCCTCTCCTACCCAGATACCGATGTTATACTGATGTGTTTTTCCATCGACAGCCCTGATAGTTTAGAAA
ACATCCCAGAAAAGTGGACCCCAGAAGTCAAGCATTTCTGTCCCAACGTGCCCATCATCCTGGTTGGGAA
TAAGAAGGATCTTCGGAATGATGAGCACACAAGGCGGGAGCTAGCCAAGATGAAGCAGGAGCCGGTGAAA
CCTGAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTTTTGGGTACATGGAGTGTTCAGCAAAGACCA
AAGATGGAGTGAGAGAGGTTTTTGAAATGGCTACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAGAAAAA
ATCTGGGTGCCTTGTCTTGTGA

Translation (193 aa):
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLR
PLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVK
PEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKKSGCLVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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