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Report for CCDS56705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56705.1 Public Mus musculus 10 Tspan15 23 108 98 CCDS HistoryNCBI Gene:70423Re-query CCDS DB by CCDS ID:56705.1Re-query CCDS DB by GeneID:70423See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56705.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047883.10 ENSMUSP00000047029.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047883.10Link to Ensembl Protein Viewer:ENSMUSP00000047029.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000047883Re-query CCDS DB by Protein ID:ENSMUSP00000047029
Original member Current member NCBI NM_197996.2 NP_932113.2 Accepted alive Link to Nucleotide Sequence:NM_197996.2Link to Protein Sequence:NP_932113.2Re-query CCDS DB by Nucleotide ID:NM_197996Re-query CCDS DB by Protein ID:NP_932113Link to BLAST:NP_932113.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932113.2 294 F7BWT7-1 294 100% 0 0

Chromosomal Locations for CCDS 56705.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 62188013 62188162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62188643 62188759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62189814 62189861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62191468 62191584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62193867 62193962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62201778 62201852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62203080 62203265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62231020 62231115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGCCTCGCGGGGACTCGGAGCAGGTGCGCTACTGCGCGCGCTTCTCCTATCTTTGGCTCAAGTTCTCTC
TCATCATCTACTCCACCGTGTTCTGGCTGATTGGGGGCCTGGTCCTGTCAGTGGGGATCTACGCAGAGGC
AGAGCGGCAGAAATACAAAACCCTGGAGAGTGCCTTCCTGGCCCCCGCCATCATCCTCATCCTCCTGGGG
GTGGTCATGTTCATCGTCTCCTTCATCGGGGTGCTGGCTTCCCTCCGGGACAACCTGTGCCTTCTGCAGT
CGTTTATGTATATCCTGGGGATCTGCCTGGTCATGGAGCTTATTGGTGGCATAGTGGCTTTGATCTTCCG
GAACCAGACTATTGACTTTCTGAACGACAACATCCGGAGAGGAATCGAGAATTACTACGATGATCTGGAC
TTCAAGAACATCATGGACTTTGTTCAGAAGAAGTTCAAGTGCTGTGGCGGGGAGGACTACAGAGACTGGA
GCAAAAACCAGTACCATGACTGCAGCGCCCCCGGGCCCCTGGCCTGCGGGGTGCCCTACACCTGCTGCAT
CAGGAACACGACAGATGTTGTCAACACCATGTGTGGCTACAAAACAATCGACAAGGAGCGCCTGAATGCA
CAGAACATCATTCACGTGCGGGGCTGCACCAACGCCGTGTTGATATGGTTCATGGACAACTATACCATCA
TGGCGGGCCTTTTACTGGGCATCCTGCTTCCTCAGTTTCTTGGTGTGCTGCTGACCCTACTGTACATCAC
CCGTGTGGAGGACATTATCTTGGAGCACTCTGTCACGGATGGATTGCTGGGACCTGGTGCCAAGTCCAGA
ACGGACACAGCAGGCACTGGATGCTGCCTGTGCTATCCCGATTAG

Translation (294 aa):
MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGGLVLSVGIYAEAERQKYKTLESAFLAPAIILILLG
VVMFIVSFIGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFLNDNIRRGIENYYDDLD
FKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTDVVNTMCGYKTIDKERLNA
QNIIHVRGCTNAVLIWFMDNYTIMAGLLLGILLPQFLGVLLTLLYITRVEDIILEHSVTDGLLGPGAKSR
TDTAGTGCCLCYPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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