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Report for CCDS7342.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7342.1 Public Homo sapiens 10 AP3M1 24 110 108 CCDS HistoryNCBI Gene:26985Re-query CCDS DB by CCDS ID:7342.1Re-query CCDS DB by GeneID:26985See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7342.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355264.9 ENSP00000347408.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355264.9Link to Ensembl Protein Viewer:ENSP00000347408.4Re-query CCDS DB by Nucleotide ID:ENST00000355264Re-query CCDS DB by Protein ID:ENSP00000347408
Original member Current member EBI ENST00000372745.1 ENSP00000361831.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372745.1Link to Ensembl Protein Viewer:ENSP00000361831.1Re-query CCDS DB by Nucleotide ID:ENST00000372745Re-query CCDS DB by Protein ID:ENSP00000361831
Original member Current member NCBI NM_001320263.2 NP_001307192.1 Accepted alive Link to Nucleotide Sequence:NM_001320263.2Link to Protein Sequence:NP_001307192.1Re-query CCDS DB by Nucleotide ID:NM_001320263Re-query CCDS DB by Protein ID:NP_001307192Link to BLAST:NP_001307192.1
Original member Current member NCBI NM_001320264.2 NP_001307193.1 Accepted alive Link to Nucleotide Sequence:NM_001320264.2Link to Protein Sequence:NP_001307193.1Re-query CCDS DB by Nucleotide ID:NM_001320264Re-query CCDS DB by Protein ID:NP_001307193Link to BLAST:NP_001307193.1
Original member Current member NCBI NM_012095.6 NP_036227.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012095.6Link to Protein Sequence:NP_036227.1Re-query CCDS DB by Nucleotide ID:NM_012095Re-query CCDS DB by Protein ID:NP_036227Link to BLAST:NP_036227.1
Original member Current member NCBI NM_207012.4 NP_996895.1 Accepted alive Link to Nucleotide Sequence:NM_207012.4Link to Protein Sequence:NP_996895.1Re-query CCDS DB by Nucleotide ID:NM_207012Re-query CCDS DB by Protein ID:NP_996895Link to BLAST:NP_996895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307192.1 418 Q9Y2T2 418 100% 0 0
NP_001307193.1 418 Q9Y2T2 418 100% 0 0
NP_036227.1 418 Q9Y2T2 418 100% 0 0
NP_996895.1 418 Q9Y2T2 418 100% 0 0

Chromosomal Locations for CCDS 7342.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 74123810 74123910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74124380 74124524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74126148 74126355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74129108 74129241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74129907 74129992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74134027 74134164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74136632 74136803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 74138107 74138379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGATCCACAGTCTATTTCTCATAAACTGTTCCGGTGACATATTTCTAGAGAAGCACTGGAAGAGCGTTG
TGAGCCAGTCTGTCTGTGATTATTTCTTTGAAGCTCAAGAGAAAGCTGCTGATGTTGAAAATGTACCACC
TGTCATTTCAACACCTCACCACTACCTCATCAGTATCTACCGGGATAAGCTCTTCTTTGTATCTGTCATA
CAGACCGAAGTGCCACCTCTCTTTGTAATTGAGTTCCTACATCGAGTTGCTGACACTTTTCAGGACTACT
TTGGTGAGTGTTCAGAGGCTGCAATTAAGGATAATGTGGTCATAGTATATGAACTCTTAGAAGAAATGTT
AGACAATGGATTTCCACTGGCTACCGAATCTAACATTTTGAAAGAATTGATTAAACCACCAACAATTCTA
CGCTCTGTTGTCAACTCTATTACAGGCAGTAGTAATGTTGGGGACACACTCCCCACCGGGCAGCTGTCCA
ACATACCATGGCGTCGGGCAGGGGTAAAGTACACAAACAATGAAGCCTATTTTGATGTTGTTGAAGAAAT
AGACGCAATTATAGATAAATCAGGATCTACAGTCTTTGCAGAAATTCAGGGGGTCATTGATGCTTGCATT
AAACTATCTGGAATGCCTGATCTCTCCCTTTCTTTCATGAACCCTAGGCTTCTGGATGATGTCAGCTTTC
ACCCCTGCATCCGGTTCAAGCGTTGGGAATCTGAAAGAGTTTTGTCATTTATTCCTCCAGATGGAAATTT
CCGACTCATATCATACCGTGTCAGCTCACAAAATCTAGTGGCAATACCAGTGTATGTGAAACATAGTATC
AGCTTTAAGGAGAACAGTTCTTGCGGCAGATTTGATATAACAATTGGACCAAAGCAGAATATGGGGAAAA
CTATTGAAGGAATTACAGTGACAGTTCACATGCCAAAAGTTGTGCTGAACATGAACCTGACACCCACACA
AGGCAGCTATACATTTGATCCAGTCACCAAGGTACTAACATGGGATGTGGGAAAAATTACTCCACAAAAG
CTCCCAAGTCTTAAAGGACTGGTAAATTTACAGTCTGGAGCCCCCAAACCAGAAGAGAATCCGAGCCTCA
ACATACAGTTTAAGATCCAGCAGCTTGCTATTTCAGGCTTAAAAGTAAACCGTTTGGACATGTATGGGGA
GAAATATAAGCCATTTAAAGGAGTCAAATACGTCACGAAAGCTGGAAAGTTCCAAGTGAGGACATGA

Translation (418 aa):
MIHSLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISIYRDKLFFVSVI
QTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPLATESNILKELIKPPTIL
RSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFDVVEEIDAIIDKSGSTVFAEIQGVIDACI
KLSGMPDLSLSFMNPRLLDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSI
SFKENSSCGRFDITIGPKQNMGKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQK
LPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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