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Report for CCDS81654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81654.1 Public Homo sapiens 12 CD9 24 110 108 CCDS HistoryNCBI Gene:928Re-query CCDS DB by CCDS ID:81654.1Re-query CCDS DB by GeneID:928See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382515.7 ENSP00000371955.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382515.7Link to Ensembl Protein Viewer:ENSP00000371955.2Re-query CCDS DB by Nucleotide ID:ENST00000382515Re-query CCDS DB by Protein ID:ENSP00000371955
Original member Current member EBI ENST00000642746.1 ENSP00000494858.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642746.1Link to Ensembl Protein Viewer:ENSP00000494858.1Re-query CCDS DB by Nucleotide ID:ENST00000642746Re-query CCDS DB by Protein ID:ENSP00000494858
Original member Current member EBI ENST00000646407.1 ENSP00000495090.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646407.1Link to Ensembl Protein Viewer:ENSP00000495090.1Re-query CCDS DB by Nucleotide ID:ENST00000646407Re-query CCDS DB by Protein ID:ENSP00000495090
Original member Current member EBI ENST00000676764.1 ENSP00000502917.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676764.1Link to Ensembl Protein Viewer:ENSP00000502917.1Re-query CCDS DB by Nucleotide ID:ENST00000676764Re-query CCDS DB by Protein ID:ENSP00000502917
Original member Current member NCBI NM_001330312.2 NP_001317241.1 Accepted alive Link to Nucleotide Sequence:NM_001330312.2Link to Protein Sequence:NP_001317241.1Re-query CCDS DB by Nucleotide ID:NM_001330312Re-query CCDS DB by Protein ID:NP_001317241Link to BLAST:NP_001317241.1

Chromosomal Locations for CCDS 81654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6232664 6232729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6233412 6233486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6235229 6235327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6235476 6235565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6236192 6236275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6237763 6237828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (480 nt):
ATGATGCTGGTGGGCTTCCTGGGCTGCTGCGGGGCTGTGCAGGAGTCCCAGTGCATGCTGGGACTGTTCT
TCGGCTTCCTCTTGGTGATATTCGCCATTGAAATAGCTGCGGCCATCTGGGGATATTCCCACAAGGATGA
GGTGATTAAGGAAGTCCAGGAGTTTTACAAGGACACCTACAACAAGCTGAAAACCAAGGATGAGCCCCAG
CGGGAAACGCTGAAAGCCATCCACTATGCGTTGAACTGCTGTGGTTTGGCTGGGGGCGTGGAACAGTTTA
TCTCAGACATCTGCCCCAAGAAGGACGTACTCGAAACCTTCACCGTGAAGTCCTGTCCTGATGCCATCAA
AGAGGTCTTCGACAATAAATTCCACATCATCGGCGCAGTGGGCATCGGCATTGCCGTGGTCATGATATTT
GGCATGATCTTCAGTATGATCTTGTGCTGTGCTATCCGCAGGAACCGCGAGATGGTCTAG

Translation (159 aa):
MMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQ
RETLKAIHYALNCCGLAGGVEQFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIF
GMIFSMILCCAIRRNREMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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