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Report for CCDS35144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35144.1 Public Homo sapiens 9 NIBAN2 24 110 108 CCDS HistoryNCBI Gene:64855Re-query CCDS DB by CCDS ID:35144.1Re-query CCDS DB by GeneID:64855See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373314.7 ENSP00000362411.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373314.7Link to Ensembl Protein Viewer:ENSP00000362411.3Re-query CCDS DB by Nucleotide ID:ENST00000373314Re-query CCDS DB by Protein ID:ENSP00000362411
Original member Current member NCBI NM_001035534.3 NP_001030611.1 Accepted alive Link to Nucleotide Sequence:NM_001035534.3Link to Protein Sequence:NP_001030611.1Re-query CCDS DB by Nucleotide ID:NM_001035534Re-query CCDS DB by Protein ID:NP_001030611Link to BLAST:NP_001030611.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001030611.1 733 Q96TA1-2 733 100% 0 0

Chromosomal Locations for CCDS 35144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127506845 127507431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127507867 127507978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127508093 127508200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127508422 127508538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127508976 127509131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127510146 127510333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127516857 127517019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127517112 127517216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127517826 127517941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127523679 127523846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127525058 127525163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127527194 127527322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127531648 127531778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127578922 127578937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2202 nt):
ATGGGGTGGATGGGAGAAAAAACCGGGAAGATCCTGACGGAGTTCCTCCAGTTCTATGAAGACCAGTATG
GCGTGGCTCTCTTCAACAGCATGCGCCATGAGATTGAGGGCACGGGGCTGCCGCAGGCCCAGCTGCTCTG
GCGCAAGGTGCCACTGGACGAGCGCATCGTCTTCTCGGGGAACCTCTTCCAGCACCAGGAGGACAGCAAG
AAGTGGAGAAACCGCTTCAGCCTCGTGCCCCACAACTACGGGCTGGTGCTCTACGAAAACAAAGCGGCCT
ATGAGCGGCAGGTCCCACCACGAGCCGTCATCAACAGTGCAGGCTACAAAATCCTCACGTCCGTGGACCA
ATACCTGGAGCTCATTGGCAACTCCTTACCAGGGACCACGGCAAAGTCGGGCAGTGCCCCCATCCTCAAG
TGCCCCACACAGTTCCCGCTCATCCTCTGGCATCCTTATGCGCGTCACTACTACTTCTGCATGATGACAG
AAGCCGAGCAGGACAAGTGGCAGGCTGTGCTGCAGGACTGCATCCGGCACTGCAACAATGGAATCCCTGA
GGACTCCAAGGTAGAGGGCCCTGCGTTCACAGATGCCATCCGCATGTACCGACAGTCCAAGGAGCTGTAC
GGCACCTGGGAGATGCTGTGTGGGAACGAGGTGCAGATCCTGAGCAACCTGGTGATGGAGGAGCTGGGCC
CTGAGCTGAAGGCAGAGCTCGGCCCGCGGCTGAAGGGGAAACCGCAGGAGCGGCAGCGGCAGTGGATCCA
GATCTCGGACGCCGTGTACCACATGGTGTACGAGCAGGCCAAGGCGCGCTTCGAGGAGGTGCTGTCCAAG
GTGCAGCAGGTGCAGCCGGCCATGCAGGCCGTCATCCGAACTGACATGGACCAAATTATCACCTCCAAGG
AGCACCTTGCCAGCAAGATCCGAGCCTTCATCCTCCCCAAGGCAGAGGTGTGCGTGCGGAACCATGTCCA
GCCCTACATCCCATCCATCCTGGAGGCCCTGATGGTCCCCACCAGCCAGGGCTTCACTGAGGTGCGAGAT
GTCTTCTTCAAGGAGGTCACGGACATGAACCTGAACGTCATCAACGAGGGCGGCATTGACAAGCTGGGCG
AGTACATGGAGAAGCTGTCCCGGCTGGCGTACCACCCCCTGAAGATGCAGAGCTGCTATGAGAAGATGGA
GTCGCTGCGACTGGACGGGCTGCAGCAGCGATTTGATGTGTCCAGCACGTCCGTGTTCAAGCAGCGAGCC
CAGATCCACATGCGGGAGCAAATGGACAATGCCGTGTATACGTTCGAGACCCTCCTGCACCAGGAGCTGG
GGAAGGGGCCCACCAAGGAGGAGCTGTGCAAGTCCATCCAGCGGGTCCTGGAGCGGGTGCTGAAGAAATA
CGACTACGACAGCAGCTCTGTGCGGAAGAGGTTCTTCCGGGAGGCGCTGCTGCAGATCAGCATCCCGTTC
CTGCTCAAGAAGCTGGCCCCTACCTGCAAGTCGGAGCTGCCCCGGTTCCAGGAGCTGATCTTCGAGGACT
TTGCCAGGTTCATCCTGGTGGAAAACACGTACGAGGAGGTGGTGCTGCAGACCGTCATGAAGGACATCCT
GCAGGCTGTGAAGGAGGCCGCGGTGCAGAGGAAGCACAACCTCTACCGGGACAGCATGGTCATGCACAAC
AGCGACCCCAACCTGCACCTGCTGGCCGAGGGCGCCCCCATCGACTGGGGCGAGGAGTACAGCAACAGCG
GCGGGGGCGGCAGCCCCAGCCCCAGCACCCCGGAGTCAGCCACCCTCTCGGAAAAGCGACGGCGCGCCAA
GCAGGTGGTCTCTGTGGTCCAGGATGAGGAGGTGGGGCTGCCCTTTGAGGCTAGCCCTGAGTCACCACCA
CCTGCGTCCCCGGACGGTGTCACTGAGATCCGAGGCCTGCTGGCCCAAGGTCTGCGGCCTGAGAGCCCCC
CACCAGCCGGCCCCCTGCTCAACGGGGCCCCCGCTGGGGAGAGTCCCCAGCCTAAGGCCGCCCCCGAGGC
CTCCTCGCCGCCTGCCTCACCCCTCCAGCATCTCCTGCCTGGAAAGGCTGTGGACCTTGGGCCCCCCAAG
CCCAGCGACCAGGAGACTGGAGAGCAGGTGTCCAGCCCCAGCAGCCACCCCGCCCTCCACACCACCACCG
AGGACAGTGCAGGGGTGCAGACTGAGTTCTAG

Translation (733 aa):
MGWMGEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPLDERIVFSGNLFQHQEDSK
KWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAKSGSAPILK
CPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELY
GTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSK
VQQVQPAMQAVIRTDMDQIITSKEHLASKIRAFILPKAEVCVRNHVQPYIPSILEALMVPTSQGFTEVRD
VFFKEVTDMNLNVINEGGIDKLGEYMEKLSRLAYHPLKMQSCYEKMESLRLDGLQQRFDVSSTSVFKQRA
QIHMREQMDNAVYTFETLLHQELGKGPTKEELCKSIQRVLERVLKKYDYDSSSVRKRFFREALLQISIPF
LLKKLAPTCKSELPRFQELIFEDFARFILVENTYEEVVLQTVMKDILQAVKEAAVQRKHNLYRDSMVMHN
SDPNLHLLAEGAPIDWGEEYSNSGGGGSPSPSTPESATLSEKRRRAKQVVSVVQDEEVGLPFEASPESPP
PASPDGVTEIRGLLAQGLRPESPPPAGPLLNGAPAGESPQPKAAPEASSPPASPLQHLLPGKAVDLGPPK
PSDQETGEQVSSPSSHPALHTTTEDSAGVQTEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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