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Report for CCDS52227.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52227.1 Public Mus musculus 7 Klk11 23 108 98 CCDS HistoryNCBI Gene:56538Re-query CCDS DB by CCDS ID:52227.1Re-query CCDS DB by GeneID:56538See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52227.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080211.11 ENSMUSP00000079101.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080211.11Link to Ensembl Protein Viewer:ENSMUSP00000079101.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000080211Re-query CCDS DB by Protein ID:ENSMUSP00000079101
Original member Current member NCBI NM_001177373.1 NP_001170844.1 Accepted alive Link to Nucleotide Sequence:NM_001177373.1Link to Protein Sequence:NP_001170844.1Re-query CCDS DB by Nucleotide ID:NM_001177373Re-query CCDS DB by Protein ID:NP_001170844Link to BLAST:NP_001170844.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170844.1 276 Q9QYN3-1 276 100% 0 0

Chromosomal Locations for CCDS 52227.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43774759 43774801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43776480 43776554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43776881 43777037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43777488 43777753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43778330 43778466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43778785 43778937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGAGGAGGCTGAAGAGTGACTGGAAATTATCTACAGAAACCAGGGAACCTGGCGCCCGCCCTGCCCTAC
TCCAGGCCAGGATGATTCTCCGACTCATTGCACTTGCTCTGGTAACAGGGCACGTAGGGGGAGAGACGAG
GATCATCAAGGGTTATGAGTGCAGGCCTCACTCACAGCCATGGCAGGTGGCCCTCTTTCAGAAGACACGG
CTTCTCTGTGGGGCAACCCTCATCGCCCCCAAATGGCTCCTGACAGCAGCCCACTGCCGCAAGCCCCATT
ACGTGATCCTCCTTGGAGAGCACAATCTAGAGAAGACAGACGGCTGTGAGCAGAGGCGGATGGCCACTGA
GTCCTTCCCCCACCCCGACTTCAACAACAGCCTCCCCAACAAAGACCACCGGAATGACATAATGCTTGTG
AAGATGTCGTCTCCCGTCTTCTTTACCCGAGCTGTGCAGCCACTCACCCTGTCCCCACACTGTGTCGCTG
CAGGCACCAGCTGCCTCATTTCTGGATGGGGCACCACGTCCAGCCCCCAGTTGCGCCTGCCTCATTCCTT
GCGATGTGCCAATGTCTCCATCATCGAACACAAGGAGTGTGAGAAGGCCTACCCGGGCAACATCACAGAC
ACCATGCTGTGCGCCAGTGTTCGGAAAGAGGGCAAGGACTCCTGTCAGGGTGACTCTGGAGGCCCCCTGG
TCTGCAACGGATCTCTTCAAGGCATCATCTCCTGGGGTCAGGACCCATGTGCCGTCACCAGAAAGCCTGG
TGTCTATACAAAAGTCTGCAAATACTTTAACTGGATCCACGAGGTTATGAGGAACAATTAG

Translation (276 aa):
MRRLKSDWKLSTETREPGARPALLQARMILRLIALALVTGHVGGETRIIKGYECRPHSQPWQVALFQKTR
LLCGATLIAPKWLLTAAHCRKPHYVILLGEHNLEKTDGCEQRRMATESFPHPDFNNSLPNKDHRNDIMLV
KMSSPVFFTRAVQPLTLSPHCVAAGTSCLISGWGTTSSPQLRLPHSLRCANVSIIEHKECEKAYPGNITD
TMLCASVRKEGKDSCQGDSGGPLVCNGSLQGIISWGQDPCAVTRKPGVYTKVCKYFNWIHEVMRNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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