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Report for CCDS92613.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92613.1 Public Homo sapiens 19 GMFG 24 110 108 CCDS HistoryNCBI Gene:9535Re-query CCDS DB by CCDS ID:92613.1Re-query CCDS DB by GeneID:9535See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92613.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253054.12 ENSP00000253054.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000253054.12Link to Ensembl Protein Viewer:ENSP00000253054.8Re-query CCDS DB by Nucleotide ID:ENST00000253054Re-query CCDS DB by Protein ID:ENSP00000253054
Original member Current member EBI ENST00000600322.5 ENSP00000471139.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600322.5Link to Ensembl Protein Viewer:ENSP00000471139.1Re-query CCDS DB by Nucleotide ID:ENST00000600322Re-query CCDS DB by Protein ID:ENSP00000471139
Current member NCBI NM_001411106.1 NP_001398035.1 Accepted alive Link to Nucleotide Sequence:NM_001411106.1Link to Protein Sequence:NP_001398035.1Re-query CCDS DB by Nucleotide ID:NM_001411106Re-query CCDS DB by Protein ID:NP_001398035Link to BLAST:NP_001398035.1

Chromosomal Locations for CCDS 92613.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39328477 39328548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39329000 39329073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39329544 39329626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39333077 39333126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39335261 39335310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39335435 39335435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGAAGGTGGACAAAGACCGGCAGATGGTGGTGCTGGAGGAAGAATTTCAGAACATTTCCCCAGAGGAGC
TCAAAATGGAGTTGCCGGAGAGACAGCCCAGGTTCGTGGTTTACAGCTACAAGTACGTGCATGACGATGG
CCGAGTGTCCTACCCTTTGTGTTTCATCTTCTCCAGCCCTGTGGGCTGCAAGCCGGAACAACAGATGATG
TATGCAGGGAGTAAAAACAGGCTGGTGCAGACAGCAGAGCTCACAAAGGTGTTCGAAATCCGCACCACTG
ATGACCTCACTGAGGCCTGGCTCCAAGAAAAGTTGTCTTTCTTTCGTTGA

Translation (109 aa):
MKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMM
YAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQEKLSFFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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