Conserved Protein Domain Family
PTS_2-RNA

?
pfam01885: PTS_2-RNA (this model, PSSM-Id:280125 is obsolete and has been replaced by 460371)
RNA 2'-phosphotransferase, Tpt1 / KptA family
Tpt1 catalyzes the last step of tRNA splicing in yeast. It transfers the splice junction 2'-phosphate from ligated tRNA to NAD, to produce ADP-ribose 1"-2"-cyclic phosphate. This is presumed to be followed by a transesterification step to release the RNA. The first step of this reaction is similar to that catalyzed by some bacterial toxins. E. coli KptA and mouse Tpt1 are likely to use the same reaction mechanism.
Statistics
?
PSSM-Id: 280125
Aligned: 251 rows
Threshold Bit Score: 87.1239
Created: 21-Jun-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q7UEP2        10 TSKFLSLVLRHQPGV----------IGMTLDEQGWLEIDGLIA--NANtrg-----kkLTLELIHEVVAT-NDKKRFVLS 71  Rhodopirellula ...
Q2HCC9        60 IAKALMFVVKRAIQKedvee-dedgEYLVADPEGWISLADVLThsRISal-------gATIEDIQRVVGT-AAKSRFDlr 130 Chaetomium glob...
WP_012941746  40 LSKFVSGALRHFPED----------VGLELDAHGWTDYEALAG--AVEaky-----dwAEPCHVAAVIAT-DPKGRFERT 101 Haloterrigena t...
XP_002987040  24 LGRALLKVLRQPVLH----------PNLEMRPDGFCKLEELLE--LDFmtksgvplssHTAAEAIKAVDK-LTKKLAKMV 90  Selaginella moe...
XP_007853293  60 ITRQMSWLLRHAAQS----------QGIRIRPDGYVRVNDLLS--YYLfk-------rYNMKSLQELLRY-DPKHRFEFK 119 Moniliophthora ...
XP_007295061  61 ISKALTWLLKRTIEAgeeq--gegeEKLVADSDGWVGCQE-LKrsNLAsl-------eVTFPELKAFVESpASKSRFGlk 130 Marssonina brun...
XP_008083483  60 ISKALTFVLKRTIKEgekqe-egteEKLVADADGWVDCEDVLEkeNLKsl-------eVTFEELHSVVTS--PKSRFAvk 129 Glarea lozoyens...
XP_001593651  61 VTRALTKLLKRFSEEdnel--eegtEKFVASAEGWLSCEKVLK--NLEtl-------dLTLLELRKILQSpSSKPRFTlk 129 Sclerotinia scl...
XP_003664731  60 IAKALMFVVKRAIQKedvee-gdegEYLVADPEGWVSVADVLAhsRLSal-------gATFDDIRRVIAN-APKPRFDlr 130 Myceliophthora ...
XP_007794685  59 IAKAVAFVLKRSVPEseaseddeeaGHLHSDAEGWVSVAHVLEhpKIAdl-------gATLKDLQRIVST-SNKSRFAlr 130 Eutypa lata UCREL1
Q7UEP2        72 --------D--------D--------G-LRIRASQ------GHS--VAg--VD-------L--NL---TE---------- 94  Rhodopirellula ...
Q2HCC9       131 lvsdt------egnaeeP--------AsWQISRIA------SKEtvTSp--TPv--------gDKltaES---------- 170 Chaetomium glob...
WP_012941746 102 --------DasgtddgaG--------N-GLVRASY------GHS--VD---VD-------L--GP---TD---------- 131 Haloterrigena t...
XP_002987040  91 --------De------tG--------A-LYIGALQ----------------------------EPv--APngeteqlfqk 117 Selaginella moe...
XP_007853293 120 --------E--------EeglwrgskE-WLVRHQG------GHT--IKgvsSS-------A--KRi--TS---------- 153 Moniliophthora ...
XP_007295061 131 lrpdakevEdeee-aasA--------SvYLIKANP------SPAgpA----SPtsattpkY--TPislTT---------- 179 Marssonina brun...
XP_008083483 130 lksds------daeeadE--------SdYLIRMIAsaipstTPSatTQk-----------L--TPlstTT---------- 172 Glarea lozoyens...
XP_001593651 130 sisss------etesdsP--------SdYLIRLN-------TPStpTTi--TPsnismasL--ELitmSS---------- 174 Sclerotinia scl...
XP_003664731 131 kasna------daepeeP--------AaWQVSRIT------HKEttASp--VPv--------gDKltaDS---------- 170 Myceliophthora ...
XP_007794685 131 -------qRpeat-aedA--------TaYQVRPNS------KRNivSEp--V--------LvgEQfttET---------- 168 Eutypa lata UCREL1
Q7UEP2        95 ANPPAtLYHGTVDAFLPRIR-EQGLQK-R--SRNHVHLSADEat-aTN-VGSRR-GK--------P---KLLLIAAQRMH 156 Rhodopirellula ...
Q2HCC9       171 PNiPEfVVYETSYQRYPLILaLGAITR-ApgASEYRTFVP------VT-VDNEGnESrqs--pagEtaeVSVWVHLRTAL 240 Chaetomium glob...
WP_012941746 132 EPVPDeLYHGTAPATLASIR-EDGLRP-M--SRQQVHLSGSRea-aRR-VGQRHaND--------P---VVLVVDATAML 194 Haloterrigena t...
XP_002987040 118 IEKSPvCVYGTSKQELEEIM-KNGLTA-S--SSNPMYLVMAVpd-aEIaSSMRN-SS--------E---VLITVNFQKAR 180 Selaginella moe...
XP_007853293 154 FPKSSaAIYCTDIQRWKTFS-EHGIWSeR--GDELIHLVRKVpeyeGI-EAFNP-TV--------R---ILISIDVEKAM 217 Moniliophthora ...
XP_007295061 180 EDlPDfVVYETSYPNYPLILaSGGIKR-Ag-GQDLLQFAT------IV-VQEDGsEVra----pkSdadVSIHINLRQVM 246 Marssonina brun...
XP_008083483 173 EDlPDlIVYETSYANYPLILqSGGIKR-Ag-GQPHLQFAS------IQ-INEDGtEErk-----sSdadVSIYIDLRAVM 238 Glarea lozoyens...
XP_001593651 175 ADlPDfVVYETSYSNYPLILaSGGIRK-Ag-GQSHLSFTS------IF-ISSDAtETrtristnkDdadVSIYISLKTTI 245 Sclerotinia scl...
XP_003664731 171 PDlPEfVIYETSYQRYPLLLaLGAITR-ApgGSEYRAFVP------VT-VDEEGnESrqha-gagDaaeISIWIHLRTAL 241 Myceliophthora ...
XP_007794685 169 EDlPEfIVYETSYQGYPLILaSGGIKR-Ag-GSTHLSFSP-------V-TPDRA-----------SdadVSIWIELRSAL 227 Eutypa lata UCREL1
Q7UEP2       157 -QDG-HIFYLSENEVWLVD 173 Rhodopirellula baltica SH 1
Q2HCC9       241 qAEPsITWYRSDSGTIITT 259 Chaetomium globosum CBS 148.51
WP_012941746 195 -ADD-QRITKRGRETYTTD 211 Haloterrigena turkmenica
XP_002987040 181 -KDRsIEFYTSENGLIFSs 198 Selaginella moellendorffii
XP_007853293 218 -HDGdIMFYKINDGSLVTD 235 Moniliophthora roreri MCA 2997
XP_007295061 247 eAEPkIRWARTDAGTVVTA 265 Marssonina brunnea f. sp. 'multigermtubi' MB_m1
XP_008083483 239 eKEPkIAWAKTESGNVVTV 257 Glarea lozoyensis ATCC 20868
XP_001593651 246 eSNPqIKWYRNGNGGIVSE 264 Sclerotinia sclerotiorum 1980 UF-70
XP_003664731 242 qAEPsIAWRRSESGAIVTv 260 Myceliophthora thermophila ATCC 42464
XP_007794685 228 eAAPeIKWQRTESGSIVTA 246 Eutypa lata UCREL1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap