2BYE


Conserved Protein Domain Family
RA1_PLC-epsilon

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cd17229: RA1_PLC-epsilon 
Click on image for an interactive view with Cn3D
Ras-associating (RA) domain 1 found in Phosphatidylinositide-specific phospholipase C (PLC)-epsilon
PLC is a signaling enzyme that hydrolyzes membrane phospholipids to generate inositol triphosphate. PLC-epsilon represents a novel forth class of PLC that has a PLC catalytic core domain, a CDC25 guanine nucleotide exchange factor domain and two RA (Ras-association) domains. RA domain has the beta-grasp ubiquitin-like fold with low sequence similarity to ubiquitin. Although PLC RA1 and RA2 have homologous ubiquitin-like folds only RA2 can bind Ras and activate it. RA domain-containing proteins function by interacting with Ras proteins directly or indirectly and involve in several different functions ranging from tumor suppression to being oncoproteins. Ras proteins are small GTPases that are involved in cellular signal transduction. This family corresponds to the first RA domain of PLC-epsilon.
Statistics
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PSSM-Id: 340749
Aligned: 6 rows
Threshold Bit Score: 185.814
Created: 6-Jul-2015
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conserved
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1: key conserved lysine K48, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K48/R (Ub numbering) is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering), the other 6 lysines are not conserved in this subfamily; may have other functions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                    #    
2BYE_A          3 ERKCLQTHRVTVHGVPGPEPFTVFTINGgTKAKQLLQQILTNEqdikpvttDYFLMEEKYFISKEKnecrkqPFQRAIGP 82   human
EOB05682     1996 ERKASVPYKVTIHGIPGPEPFTVFNISAgTTAAQLLQQLLATTkgtescaaDYFLMEEKSFISKEKsecrkpPFQRVIGS 2075 mallard
NP_001155125 1970 ERRSVQQHKVTVHGVPGPEPFTVICVDEfTTAKQLLDSLFPTAs------fKYMLMEERVSLSKEKk----aPQQRPLAN 2039 zebrafish
Q9P212       2007 ERKCLQTHRVTVHGVPGPEPFTVFTINGgTKAKQLLQQILTNEqdikpvttDYFLMEEKYFISKEKnecrkqPFQRAIGP 2086 human
XP_005991625 1971 ERRALNVIKVTIHGLPGPEPFTVLSITEkTTAWKLLHQILATNkgpeydvgDYYLLEEKIFLSKEKndcrkpPFQRVIGP 2050 coelacanth
OCT71791     1998 ERKAPATFKATVHGIPGPEPFTVFEISLgTNAKQLLDQILATIqgneaditDYFLMEEKCFVSKDKneckklPFQRVISP 2077 African clawe...
Feature 1                                     
2BYE_A         83 EEeIMQILSSWFPEEGYmGRIVLKTQQE 110  human
EOB05682     2076 EEgLVQLLNSWFPEEGYvGRIIFKTREE 2103 mallard
NP_001155125 2040 DErLLKLIHSWQPEDGYvGRIYLKTREQ 2067 zebrafish
Q9P212       2087 EEeIMQILSSWFPEEGYmGRIVLKTQQE 2114 human
XP_005991625 2051 EEeILKILNSWFPEEGYvGRIIFKTKEE 2078 coelacanth
OCT71791     2078 EEdILQILNSWFPEEGYaGRIILKTREE 2105 African clawed frog

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