|
Name |
Accession |
Description |
Interval |
E-value |
| cwf21_SRRM2 |
cd21375 |
cwf21 domain found in serine/arginine repetitive matrix protein 2; Serine/arginine repetitive ... |
39-102 |
1.21e-31 |
|
cwf21 domain found in serine/arginine repetitive matrix protein 2; Serine/arginine repetitive matrix protein 2 (SRRM2) is also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803). It is required for pre-mRNA splicing as component of the spliceosome. It contains a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Pssm-ID: 410601 [Multi-domain] Cd Length: 64 Bit Score: 118.97 E-value: 1.21e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118572613 39 EEELRRLEAALVKRPNPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Cdd:cd21375 1 EEELRRLEAALVKKPNPDILDHERKRRVELKCLELEEMMEEQGYSEEEIQEKVATFRLMLLEKD 64
|
|
| cwf21 |
pfam08312 |
cwf21 domain; The cwf21 family is involved in mRNA splicing. It has been isolated as a ... |
58-101 |
1.54e-07 |
|
cwf21 domain; The cwf21 family is involved in mRNA splicing. It has been isolated as a subcomplex of the splicosome in Schizosaccharomyces pombe. The function of the cwf21 domain is to bind directly to the spliceosomal protein Prp8. Mutations in the cwf21 domain prevent Prp8 from binding. The structure of this domain has recently been solved which shows this domain to be composed of two alpha helices.
Pssm-ID: 462421 [Multi-domain] Cd Length: 44 Bit Score: 49.73 E-value: 1.54e-07
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 118572613 58 LDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEK 101
Cdd:pfam08312 1 LEHERKREIEVKVLELRDELEEQGLSEEEIEEKVDELRKKLLAE 44
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2195-2452 |
2.21e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.78 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2195 PPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAI---PTAVNLADSRTPAAAAAMNLA 2271
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAaaaAATRAEAPPAAPAPPATADRG 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2272 SPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVN 2351
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2352 iagSRTAAALAPASLTS-----ARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPS 2426
Cdd:PRK07003 520 ---DAPAAAAPPAPEARpptpaAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV 596
|
250 260 270
....*....|....*....|....*....|..
gi 118572613 2427 PSSRMGQAPSQSLL------PPAQDQPRSPVP 2452
Cdd:PRK07003 597 PTPRARAATGDAPPngaaraEQAAESRGAPPP 628
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
313-411 |
6.02e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 51.70 E-value: 6.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 313 PGTTSTQRPSSPetATKQPSSPYEDKdkdkkekSATRPSPSPERSSTGPEPPAPTPllAERHGGSPQPLATTPLSQEPVN 392
Cdd:PRK14971 370 SGGRGPKQHIKP--VFTQPAAAPQPS-------AAAAASPSPSQSSAAAQPSAPQS--ATQPAGTPPTVSVDPPAAVPVN 438
|
90
....*....|....*....
gi 118572613 393 PPSEASPTRDRSPPKSPEK 411
Cdd:PRK14971 439 PPSTAPQAVRPAQFKEEKK 457
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
293-600 |
2.61e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.17 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 293 GRSPSPASGRRGEGDAPFSEPGTTSTQRPSS----PETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTP 368
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPsspdPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 369 LLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPeklpqssssessppsPQPTKVSRHASSSPESPKPAPAPG 448
Cdd:PHA03307 161 AVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA---------------ASPRPPRRSSPISASASSPAPAPG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 449 SHREISSSPTSKNRSHGRAKRDKSH--------SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSaq 520
Cdd:PHA03307 226 RSAADDAGASSSDSSSSESSGCGWGpenecplpRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSP-- 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 521 RWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPT 600
Cdd:PHA03307 304 GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG 383
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
2271-2527 |
2.91e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.11 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2271 ASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASAnlvgPRSAHATAPV 2350
Cdd:pfam17823 129 SLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSA----PTTAASSAPA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2351 NIAGSRTAAALAPASLT-SARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSS 2429
Cdd:pfam17823 205 TLTPARGISTAATATGHpAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAK 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2430 RM-GQAPSQSLLPPAQDQPRSPVPSAFSDQ-----------SRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVP 2497
Cdd:pfam17823 285 HMpSDTMARNPAAPMGAQAQGPIIQVSTDQpvhntageptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVP 364
|
250 260 270
....*....|....*....|....*....|
gi 118572613 2498 APgvPHSDVGEPPASTGAQQPSALAALQPA 2527
Cdd:pfam17823 365 VL--HTSMIPEVEATSPTTQPSPLLPTQGA 392
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
314-527 |
5.61e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 314 GTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSP---SPERSSTGPEPPAPTPLLAER-----------HGGSPQ 379
Cdd:pfam05109 480 GTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPnatSPTPAVTTPTPNATSPTLGKTsptsavttptpNATSPT 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 380 PLATTPLSQEPVNPPSEASPTRDRSPP----KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISS 455
Cdd:pfam05109 560 PAVTTPTPNATIPTLGKTSPTSAVTTPtpnaTSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSS 639
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 118572613 456 S-------PTSKNRSHGRAKRDKSHSHTPsrrMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527
Cdd:pfam05109 640 StssmslrPSSISETLSPSTSDNSTSHMP---LLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNS 715
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| cwf21_SRRM2 |
cd21375 |
cwf21 domain found in serine/arginine repetitive matrix protein 2; Serine/arginine repetitive ... |
39-102 |
1.21e-31 |
|
cwf21 domain found in serine/arginine repetitive matrix protein 2; Serine/arginine repetitive matrix protein 2 (SRRM2) is also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803). It is required for pre-mRNA splicing as component of the spliceosome. It contains a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Pssm-ID: 410601 [Multi-domain] Cd Length: 64 Bit Score: 118.97 E-value: 1.21e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118572613 39 EEELRRLEAALVKRPNPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Cdd:cd21375 1 EEELRRLEAALVKKPNPDILDHERKRRVELKCLELEEMMEEQGYSEEEIQEKVATFRLMLLEKD 64
|
|
| cwf21_SRRM3 |
cd21376 |
cwf21 domain found in serine/arginine repetitive matrix protein 3 and similar proteins; Serine ... |
37-102 |
1.36e-23 |
|
cwf21 domain found in serine/arginine repetitive matrix protein 3 and similar proteins; Serine/arginine repetitive matrix protein 3 (SRRM3) may play a role in regulating breast cancer cell invasiveness. It may also be involved in RYBP-mediated breast cancer progression. SRRM3 contains a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Pssm-ID: 410602 [Multi-domain] Cd Length: 68 Bit Score: 96.35 E-value: 1.36e-23
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 118572613 37 KGEEELRRLEAALVKRPNPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Cdd:cd21376 1 KSEEEIKKLDAALVKKPNREILDHERKRKVELKCMEMQELMEEQGYTEEEIRQKVSTFRQMLMEKE 66
|
|
| cwf21_SRRM2-like |
cd21373 |
cwf21 domain found in serine/arginine repetitive matrix proteins, SRRM2, SRRM3 and similar ... |
53-102 |
6.29e-17 |
|
cwf21 domain found in serine/arginine repetitive matrix proteins, SRRM2, SRRM3 and similar proteins; This subfamily includes SRRM2 and SRRM3, both of which contain a cwf21 domain at the N-terminus. SRRM2, also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803), is required for pre-mRNA splicing as component of the spliceosome. SRRM3 may play a role in regulating breast cancer cell invasiveness. It may be involved in RYBP-mediated breast cancer progression. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Pssm-ID: 410600 [Multi-domain] Cd Length: 50 Bit Score: 76.46 E-value: 6.29e-17
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 118572613 53 PNPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Cdd:cd21373 1 PNKEILDHERKRKIEVKCLELEDLLEEQGYTEEEIQAKVDEYRALLLEKD 50
|
|
| cwf21 |
cd21369 |
cwf21 domain; The cwf21 domain is involved in mRNA splicing; it binds directly to the ... |
55-101 |
4.44e-10 |
|
cwf21 domain; The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8. Mutations in the cwf21 domain prevents its binding to Prp8. The domain is composed of two alpha helices. Proteins containing the cwf21 domain include complexed with CEF1 protein 21 (CWC21) from budding yeast, complexed with cdc5 protein 21 (CWF21) from fission yeast, as well as their orthologs, serine/arginine repetitive matrix proteins (SRRM2 and SRRM3) from vertebrates. This domain family also includes U2-associated protein SR140 from Eumetazoa, protein RRC1, and similar proteins from plants.
Pssm-ID: 410596 [Multi-domain] Cd Length: 48 Bit Score: 57.09 E-value: 4.44e-10
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 118572613 55 PDILDHERKRRVELRCLELEEMMEEQG-YEEQQIQEKVATFRLMLLEK 101
Cdd:cd21369 1 MDEEKRAKKREIELKVMELRDELEEQGrKPEQQIQEKVEHYRDKLLQR 48
|
|
| cwf21_CWC21-like |
cd21372 |
cwf21 domain found in fungal complexed with CEF1 protein 21 (CWC21) and similar proteins; This ... |
54-102 |
4.56e-10 |
|
cwf21 domain found in fungal complexed with CEF1 protein 21 (CWC21) and similar proteins; This subfamily includes complexed with CEF1 protein 21 (CWC21) from budding yeast, complexed with cdc5 protein 21 (CWF21) from fission yeast, as well as their orthologs, serine/arginine repetitive matrix proteins (SRRM2 and SRRM3) from vertebrates. Both CWC21 and CWF21 are pre-mRNA-splicing factors that may function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome, together with ISY1. SRRM2 is required for pre-mRNA splicing as a component of the spliceosome. SRRM3 may play a role in regulating breast cancer cell invasiveness. It may be involved in RYBP-mediated breast cancer progression. Members of this family contain a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.
Pssm-ID: 410599 [Multi-domain] Cd Length: 49 Bit Score: 57.10 E-value: 4.56e-10
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 118572613 54 NPDILDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKD 102
Cdd:cd21372 1 DKEILEHERKRQIELKCLELRDELEDEGLSEEEIEEKVDELREKLLKEL 49
|
|
| cwf21 |
pfam08312 |
cwf21 domain; The cwf21 family is involved in mRNA splicing. It has been isolated as a ... |
58-101 |
1.54e-07 |
|
cwf21 domain; The cwf21 family is involved in mRNA splicing. It has been isolated as a subcomplex of the splicosome in Schizosaccharomyces pombe. The function of the cwf21 domain is to bind directly to the spliceosomal protein Prp8. Mutations in the cwf21 domain prevent Prp8 from binding. The structure of this domain has recently been solved which shows this domain to be composed of two alpha helices.
Pssm-ID: 462421 [Multi-domain] Cd Length: 44 Bit Score: 49.73 E-value: 1.54e-07
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 118572613 58 LDHERKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEK 101
Cdd:pfam08312 1 LEHERKREIEVKVLELRDELEEQGLSEEEIEEKVDELRKKLLAE 44
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2195-2452 |
2.21e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 56.78 E-value: 2.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2195 PPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAI---PTAVNLADSRTPAAAAAMNLA 2271
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAaaaAATRAEAPPAAPAPPATADRG 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2272 SPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVN 2351
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASRE 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2352 iagSRTAAALAPASLTS-----ARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPS 2426
Cdd:PRK07003 520 ---DAPAAAAPPAPEARpptpaAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQV 596
|
250 260 270
....*....|....*....|....*....|..
gi 118572613 2427 PSSRMGQAPSQSLL------PPAQDQPRSPVP 2452
Cdd:PRK07003 597 PTPRARAATGDAPPngaaraEQAAESRGAPPP 628
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2189-2605 |
3.19e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 56.49 E-value: 3.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2189 SLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSR-TPAAAAA 2267
Cdd:PHA03247 2567 SVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPdPHPPPTV 2646
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2268 MNLASPRTAVAPSAVNL----ADPRTPTAPAVNLAGARTPAALAAL-SLTGSGTPPTAANYPSSSRTPQAPASANLVGPR 2342
Cdd:PHA03247 2647 PPPERPRDDPAPGRVSRprraRRLGRAAQASSPPQRPRRRAARPTVgSLTSLADPPPPPPTPEPAPHALVSATPLPPGPA 2726
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2343 SAHATAPVNIAGSRT----AAALAPASLTSARMAPALSGANL-TSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQS 2417
Cdd:PHA03247 2727 AARQASPALPAAPAPpavpAGPATPGGPARPARPPTTAGPPApAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2418 RMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSP-VPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSV 2496
Cdd:PHA03247 2807 PPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPpPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRL 2886
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2497 PAPGVPHSdvgeppastgaQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDsegsslPVQPEVAL 2576
Cdd:PHA03247 2887 ARPAVSRS-----------TESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQP------PLAPTTDP 2949
|
410 420
....*....|....*....|....*....
gi 118572613 2577 KRVPSPTPAPKEAVREGRPPEPTPAKRKR 2605
Cdd:PHA03247 2950 AGAGEPSGAVPQPWLGALVPGRVAVPRFR 2978
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2030-2502 |
5.83e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.71 E-value: 5.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2030 SRSRTPLLPRKRSRSRSPLAIRRRSRSRTPrtargkrsltrsPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVAL 2109
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPD------------PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSR 2663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2110 nSSRMSCFSRPSMSPTPLDRCRSPGMLEPLGSSrtpmsvlqqagGSMMDGPGPRIPDHQRTsvpenhaqsrialalTAIS 2189
Cdd:PHA03247 2664 -PRRARRLGRAAQASSPPQRPRRRAARPTVGSL-----------TSLADPPPPPPTPEPAP---------------HALV 2716
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2190 LGTARPPPSMSAAGLAARMSQVPAPVPLMslrTAPAANLASRIPAASAAAMNLASARTPAIPTAvnladsrTPAAAAAMN 2269
Cdd:PHA03247 2717 SATPLPPGPAAARQASPALPAAPAPPAVP---AGPATPGGPARPARPPTTAGPPAPAPPAAPAA-------GPPRRLTRP 2786
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2270 LASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAAlsltgSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAP 2349
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPA-----GPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGD 2861
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2350 VniagSRTAAALAPASLTSARMAPALSganltspRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSqsrmtseraPSPSS 2429
Cdd:PHA03247 2862 V----RRRPPSRSPAAKPAAPARPPVR-------RLARPAVSRSTESFALPPDQPERPPQPQAPPP---------PQPQP 2921
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 118572613 2430 RMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVP 2502
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTP 2994
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
313-411 |
6.02e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 51.70 E-value: 6.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 313 PGTTSTQRPSSPetATKQPSSPYEDKdkdkkekSATRPSPSPERSSTGPEPPAPTPllAERHGGSPQPLATTPLSQEPVN 392
Cdd:PRK14971 370 SGGRGPKQHIKP--VFTQPAAAPQPS-------AAAAASPSPSQSSAAAQPSAPQS--ATQPAGTPPTVSVDPPAAVPVN 438
|
90
....*....|....*....
gi 118572613 393 PPSEASPTRDRSPPKSPEK 411
Cdd:PRK14971 439 PPSTAPQAVRPAQFKEEKK 457
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2251-2460 |
1.08e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.03 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2251 PTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSltgsgtpptAANYPSSSRTP 2330
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALA---------AARQASARGPG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2331 QAPASANLVGPRSAHATAPVnIAGSRTAAALAPASltSARMAPALSGAnlTSPRVPLSAYERVSGRTSPPLLDRARSRTP 2410
Cdd:PRK12323 446 GAPAPAPAPAAAPAAAARPA-AAGPRPVAAAAAAA--PARAAPAAAPA--PADDDPPPWEELPPEFASPAPAQPDAAPAG 520
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 118572613 2411 PSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 2460
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASA 570
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
293-600 |
2.61e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.17 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 293 GRSPSPASGRRGEGDAPFSEPGTTSTQRPSS----PETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTP 368
Cdd:PHA03307 81 ANESRSTPTWSLSTLAPASPAREGSPTPPGPsspdPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 369 LLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPeklpqssssessppsPQPTKVSRHASSSPESPKPAPAPG 448
Cdd:PHA03307 161 AVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA---------------ASPRPPRRSSPISASASSPAPAPG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 449 SHREISSSPTSKNRSHGRAKRDKSH--------SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSaq 520
Cdd:PHA03307 226 RSAADDAGASSSDSSSSESSGCGWGpenecplpRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSP-- 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 521 RWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPT 600
Cdd:PHA03307 304 GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG 383
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
231-540 |
9.55e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.24 E-value: 9.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 231 SPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAkthTTALAGRSPSPASGRRGEGDAPF 310
Cdd:PHA03307 125 SPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS---PEETARAPSSPPAEPPPSTPPAA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 311 SEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPErSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEP 390
Cdd:PHA03307 202 ASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSG-CGWGPENECPLPRPAPITLPTRIWEASGWNGPSS 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 391 VNPP-SEASPTRDRSPPKSPEKlpqssssESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREiSSSPTSKNRSHGRakr 469
Cdd:PHA03307 281 RPGPaSSSSSPRERSPSPSPSS-------PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS-RGAAVSPGPSPSR--- 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 118572613 470 dkshSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Cdd:PHA03307 350 ----SPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSP 416
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2159-2449 |
2.13e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.77 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2159 GPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAA 2238
Cdd:PRK07003 367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGD 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2239 AMNLASARTPAIPTAVNLADSRTPAAAAAMNlASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPP 2318
Cdd:PRK07003 447 APVPAKANARASADSRCDERDAQPPADSGSA-SAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2319 TAanyPSSSRTPQAPASANLVGpRSAHATAPVNI---AGSRTaaalapaSLTSARMAPALSGANLTSPRVPLSAYERVSG 2395
Cdd:PRK07003 526 AP---PAPEARPPTPAAAAPAA-RAGGAAAALDVlrnAGMRV-------SSDRGARAAAAAKPAAAPAAAPKPAAPRVAV 594
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 118572613 2396 RTSPPlldrarsRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRS 2449
Cdd:PRK07003 595 QVPTP-------RARAATGDAPPNGAARAEQAAESRGAPPPWEDIPPDDYVPLS 641
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
2271-2527 |
2.91e-04 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.11 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2271 ASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASAnlvgPRSAHATAPV 2350
Cdd:pfam17823 129 SLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTAASSTTAASSA----PTTAASSAPA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2351 NIAGSRTAAALAPASLT-SARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSS 2429
Cdd:pfam17823 205 TLTPARGISTAATATGHpAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAK 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2430 RM-GQAPSQSLLPPAQDQPRSPVPSAFSDQ-----------SRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVP 2497
Cdd:pfam17823 285 HMpSDTMARNPAAPMGAQAQGPIIQVSTDQpvhntageptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVP 364
|
250 260 270
....*....|....*....|....*....|
gi 118572613 2498 APgvPHSDVGEPPASTGAQQPSALAALQPA 2527
Cdd:pfam17823 365 VL--HTSMIPEVEATSPTTQPSPLLPTQGA 392
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2191-2411 |
4.36e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2191 GTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNL 2270
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA 449
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2271 ASPRTAVAPSAVN---LADPRTPTAPAVNLAGARTPAALAAlsltgsgtpPTAANYPSSSRTPQAPASANLVGPRSAHAT 2347
Cdd:PRK12323 450 PAPAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPA---------PADDDPPPWEELPPEFASPAPAQPDAAPAG 520
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118572613 2348 APVNiAGSRTAAALAPASLTSARMAPALSGAnltsPRVPLSAYERVSGRtsPPllDRARSRTPP 2411
Cdd:PRK12323 521 WVAE-SIPDPATADPDDAFETLAPAPAAAPA----PRAAAATEPVVAPR--PP--RASASGLPD 575
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2193-2601 |
4.38e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 4.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2193 ARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASriPAASAAAMNLASARTPAIPTAVNLADSRTPAaaaamnlas 2272
Cdd:PRK07764 395 AAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPA--PAPAPAPAPPSPAGNAPAGGAPSPPPAAAPS--------- 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2273 prtavapsavnlADPRTPTAPAVNLAGARTPAALAAlsltgsGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNI 2352
Cdd:PRK07764 464 ------------AQPAPAPAAAPEPTAAPAPAPPAA------PAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPK 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2353 AGSRTAAALAPA-------------SLTSARMAPALSGANltSPRVPLSAYERVSGRTSPPlldRARSRTPPSAPSQSRm 2419
Cdd:PRK07764 526 RSRKTWAILLPEatvlgvrgdtlvlGFSTGGLARRFASPG--NAEVLVTALAEELGGDWQV---EAVVGPAPGAAGGEG- 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2420 TSERAPSPSSRMGQAPSQSLLPPAQDQP-RSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPA 2498
Cdd:PRK07764 600 PPAPASSGPPEEAARPAAPAAPAAPAAPaPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2499 PGVPHSDVGEPPASTGAQQPSALAAlqPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKR 2578
Cdd:PRK07764 680 APPPAPAPAAPAAPAGAAPAQPAPA--PAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQ 757
|
410 420
....*....|....*....|...
gi 118572613 2579 VPSPTPAPKEAVREGRPPEPTPA 2601
Cdd:PRK07764 758 PPPPPAPAPAAAPAAAPPPSPPS 780
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2313-2523 |
4.71e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 4.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2313 GSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVniAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYER 2392
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPA--AAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2393 VSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSrcliaqttPVAGS 2472
Cdd:PRK12323 448 PAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQP--------DAAPA 519
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 118572613 2473 QSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAA 2523
Cdd:PRK12323 520 GWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASA 570
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2198-2601 |
6.41e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2198 SMSAAGLAARMSQVPAPVPLM-----SLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLAS 2272
Cdd:PRK07764 368 SDDERGLLARLERLERRLGVAggagaPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGN 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2273 PRTAVAPSAVNLADPRTPTAPAVnlAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNI 2352
Cdd:PRK07764 448 APAGGAPSPPPAAAPSAQPAPAP--AAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPEILAAVPK 525
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2353 AGSRTAAALAPA-------------SLTSARMAPALSGANltSPRVPLSAYERVSGRTSPPlldRARSRTPPSAPSQSRm 2419
Cdd:PRK07764 526 RSRKTWAILLPEatvlgvrgdtlvlGFSTGGLARRFASPG--NAEVLVTALAEELGGDWQV---EAVVGPAPGAAGGEG- 599
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2420 TSERAPSPSSRMGQAPSQSLLPPAQDQP-RSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPA 2498
Cdd:PRK07764 600 PPAPASSGPPEEAARPAAPAAPAAPAAPaPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2499 PGVPHSDVGEPPASTGAQQPSALAAlqPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKR 2578
Cdd:PRK07764 680 APPPAPAPAAPAAPAGAAPAQPAPA--PAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQ 757
|
410 420
....*....|....*....|....*...
gi 118572613 2579 VPSPTPAPKEAV-----REGRPPEPTPA 2601
Cdd:PRK07764 758 PPPPPAPAPAAApaaapPPSPPSEEEEM 785
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
287-581 |
8.52e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 8.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 287 HTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAP 366
Cdd:PHA03307 49 ELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 367 TP----LLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPP-----------KSPEKLPQSSSSESSPPSPQPTKVS 431
Cdd:PHA03307 129 SPapdlSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAalplsspeetaRAPSSPPAEPPPSTPPAAASPRPPR 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 432 RHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSH--------SHTPSRRMGRSRSPATAKRGRSRSRTPTKR 503
Cdd:PHA03307 209 RSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGpenecplpRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 118572613 504 GHSRSRSPQWRRSRSaqRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARR 581
Cdd:PHA03307 289 SSPRERSPSPSPSSP--GSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSS 364
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2151-2377 |
9.76e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 9.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2151 QAGGSMMDGPGPRIPDHQRT--SVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMSqvPAPVPLMSLRTAPAANL 2228
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPApaAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRS--PAPEALAAARQASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2229 ASRIPAASAAAMnlasarTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAA 2308
Cdd:PRK12323 445 GGAPAPAPAPAA------APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 118572613 2309 LSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVniagsrtaAALAPASLTSARMAPALSG 2377
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV--------VAPRPPRASASGLPDMFDG 579
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
162-540 |
1.01e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 162 QPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKkkkhrseseskkrkhRSPTPKSKRKSK 241
Cdd:PHA03247 2572 RPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAP---------------DPPPPSPSPAAN 2636
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 242 DKKRKRSRSTTPAPKSRRAhrstsadsasssdtSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Cdd:PHA03247 2637 EPDPHPPPTVPPPERPRDD--------------PAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTR 401
Cdd:PHA03247 2703 PPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRR 2782
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 402 DRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPA---PAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPS 478
Cdd:PHA03247 2783 LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAgplPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDV 2862
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 118572613 479 RRMGRSRSPAT--AKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Cdd:PHA03247 2863 RRRPPSRSPAAkpAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP 2926
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2178-2443 |
2.37e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2178 QSRIALALTAISLGTARPPPSMSAAGlAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLA 2257
Cdd:PRK07003 413 KAAAAAAATRAEAPPAAPAPPATADR-GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFE 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2258 DSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPP-----TAANYPSSSRTPQA 2332
Cdd:PRK07003 492 PAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAAldvlrNAGMRVSSDRGARA 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2333 -----PASANLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSP---------RVPLSAYERVSGRTS 2398
Cdd:PRK07003 572 aaaakPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPpwedippddYVPLSADEGFGGPDD 651
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 118572613 2399 P--PLLDrarsrtppSAPSQSRMTSERAPSPSSRMGQAPsqslLPPA 2443
Cdd:PRK07003 652 GfvPVFD--------SGPDDVRVAPKPADAPAPPVDTRP----LPPA 686
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
2312-2523 |
2.79e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2312 TGSGTPPTAANYPSSSRTPQAPASAnlvGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYE 2391
Cdd:PRK07003 362 VTGGGAPGGGVPARVAGAVPAPGAR---AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADR 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2392 RVSGRTSP-PLLDRARSRTPPSAPSQSRmtsERAPSPSSRMGQAPSQSLLPPAQDQPRSPVpsafsdqsrcliaqttpVA 2470
Cdd:PRK07003 439 GDDAADGDaPVPAKANARASADSRCDER---DAQPPADSGSASAPASDAPPDAAFEPAPRA-----------------AA 498
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 118572613 2471 GSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAA 2523
Cdd:PRK07003 499 PSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAA 551
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
295-687 |
3.19e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.24 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPyedkDKDKKEKSATRPSPSPERSSTGPEPPAPTPllaerh 374
Cdd:PHA03307 39 SQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTE----APANESRSTPTWSLSTLAPASPAREGSPTP------ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 375 gGSPQPLATTPLSQEPVNPPSEASPTRdRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREIS 454
Cdd:PHA03307 109 -PGPSSPDPPPPTPPPASPPPSPAPDL-SEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAP 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 455 SSPTSKNRShgrakrdkshSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRS 534
Cdd:PHA03307 187 SSPPAEPPP----------STPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 535 RSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGR 614
Cdd:PHA03307 257 LPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS 336
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 118572613 615 SRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSrtpARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Cdd:PHA03307 337 RGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRP---SRAPSSPAASAGRPTRRRARAAVAGRARRRDATGR 406
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
2183-2446 |
3.23e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2183 LALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASaaamnlasarTPAIPTAVNLADSRTP 2262
Cdd:PRK12323 361 LAFRPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA----------AARAVAAAPARRSPAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2263 AAAAAMNLASPRTAVAPSAVnladprTPTAPAVNLAGARTPAAlaalsltGSGTPPTAANYPSSSRTPQAPASANLVGPR 2342
Cdd:PRK12323 431 EALAAARQASARGPGGAPAP------APAPAAAPAAAARPAAA-------GPRPVAAAAAAAPARAAPAAAPAPADDDPP 497
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2343 SAHATAPvniagsrtaaalAPASLTSARMAPALSGANLTSPRVPlsayervsgRTSPPLLDRARSRTPPSAPSQSRMTSE 2422
Cdd:PRK12323 498 PWEELPP------------EFASPAPAQPDAAPAGWVAESIPDP---------ATADPDDAFETLAPAPAAAPAPRAAAA 556
|
250 260
....*....|....*....|....
gi 118572613 2423 RAPSPSSRMGQApSQSLLPPAQDQ 2446
Cdd:PRK12323 557 TEPVVAPRPPRA-SASGLPDMFDG 579
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2333-2454 |
3.58e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.78 E-value: 3.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2333 PASANLVGPRSAHATApvnIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYeRVSGRTSPPLLDRARSrTPPS 2412
Cdd:PRK14951 366 PAAAAEAAAPAEKKTP---ARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAA-APPAPVAAPAAAAPAA-APAA 440
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 118572613 2413 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSA 2454
Cdd:PRK14951 441 APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAA 482
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
314-527 |
5.61e-03 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.21 E-value: 5.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 314 GTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSP---SPERSSTGPEPPAPTPLLAER-----------HGGSPQ 379
Cdd:pfam05109 480 GTTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPnatSPTPAVTTPTPNATSPTLGKTsptsavttptpNATSPT 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 380 PLATTPLSQEPVNPPSEASPTRDRSPP----KSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISS 455
Cdd:pfam05109 560 PAVTTPTPNATIPTLGKTSPTSAVTTPtpnaTSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSS 639
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 118572613 456 S-------PTSKNRSHGRAKRDKSHSHTPsrrMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRS 527
Cdd:pfam05109 640 StssmslrPSSISETLSPSTSDNSTSHMP---LLTSAHPTGGENITQVTPASTSTHHVSTSSPAPRPGTTSQASGPGNS 715
|
|
| PLN02321 |
PLN02321 |
2-isopropylmalate synthase |
2375-2486 |
9.19e-03 |
|
2-isopropylmalate synthase
Pssm-ID: 215182 [Multi-domain] Cd Length: 632 Bit Score: 41.49 E-value: 9.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 118572613 2375 LSGANLTSPRVPLSAYERVSGRTSPPlldRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSP--VP 2452
Cdd:PLN02321 2 LRSPNLSSATAASPAKSLSAFTPAPT---RSSASSARFPAFLARPAAARSPSLASRASSALAASPSRPQVARRPRPeyIP 78
|
90 100 110
....*....|....*....|....*....|....
gi 118572613 2453 SAFSDQSRCLIAQTTPVAGSQSLSsgavATTTSS 2486
Cdd:PLN02321 79 NRIDDPNYVRIFDTTLRDGEQSPG----ATLTSK 108
|
|
| |
