NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1669945750|ref|NP_001357679|]
View 

neurensin-2 isoform 3 [Mus musculus]

Protein Classification

Neurensin domain-containing protein( domain architecture ID 10633065)

Neurensin domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Neurensin pfam14927
Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and ...
 20-116 3.56e-40

Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and neurensin-2. Neurensin-1 plays a role in neurite extension.


:

Pssm-ID: 434322  Cd Length: 132  Bit Score: 132.42  E-value: 3.56e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1669945750  20 WYGFDFYPNLFYNDWLGTTtLPYNPERIPIRYINRPWPSLCWKVTVAVASLFLLLGVAALTTGYAVPPKLELVNESKFSS 99
Cdd:pfam14927   1 QFGVRSYLHQFYEDCTGSI-WEDDPEGFLLQRSPQRWSSLLWKVSLSVGTLLLLLGLVALLVGYLVPPRLELFGEGELLF 79

                          90
                  ....*....|....*..
gi 1669945750 100 MEDPVADYNQALMTCRV 116
Cdd:pfam14927  80 VDSQAIDFNNALDTCKL 96
 
Name Accession Description Interval E-value
Neurensin pfam14927
Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and ...
 20-116 3.56e-40

Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and neurensin-2. Neurensin-1 plays a role in neurite extension.


Pssm-ID: 434322  Cd Length: 132  Bit Score: 132.42  E-value: 3.56e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1669945750  20 WYGFDFYPNLFYNDWLGTTtLPYNPERIPIRYINRPWPSLCWKVTVAVASLFLLLGVAALTTGYAVPPKLELVNESKFSS 99
Cdd:pfam14927   1 QFGVRSYLHQFYEDCTGSI-WEDDPEGFLLQRSPQRWSSLLWKVSLSVGTLLLLLGLVALLVGYLVPPRLELFGEGELLF 79

                          90
                  ....*....|....*..
gi 1669945750 100 MEDPVADYNQALMTCRV 116
Cdd:pfam14927  80 VDSQAIDFNNALDTCKL 96
 
Name Accession Description Interval E-value
Neurensin pfam14927
Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and ...
 20-116 3.56e-40

Neurensin; The neurensin family includes the neuronal membrane proteins neurensin-1 and neurensin-2. Neurensin-1 plays a role in neurite extension.


Pssm-ID: 434322  Cd Length: 132  Bit Score: 132.42  E-value: 3.56e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1669945750  20 WYGFDFYPNLFYNDWLGTTtLPYNPERIPIRYINRPWPSLCWKVTVAVASLFLLLGVAALTTGYAVPPKLELVNESKFSS 99
Cdd:pfam14927   1 QFGVRSYLHQFYEDCTGSI-WEDDPEGFLLQRSPQRWSSLLWKVSLSVGTLLLLLGLVALLVGYLVPPRLELFGEGELLF 79

                          90
                  ....*....|....*..
gi 1669945750 100 MEDPVADYNQALMTCRV 116
Cdd:pfam14927  80 VDSQAIDFNNALDTCKL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH