|
Name |
Accession |
Description |
Interval |
E-value |
| Endostatin-like |
cd00247 |
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of ... |
1340-1510 |
3.75e-115 |
|
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of collagen XV/XVIII, a proteoglycan/collagen found in vessel walls and basement membranes; this domain has a compact globular fold similar to that of C-type lectins; endostatin XVIII is monomeric and contains a heparin-binding epitope and zinc binding sites while endostatin XV is trimeric and contains neither of these sites; the generation of endostatin or endostatin-like collagen XV/XVIII fragments is catalyzed by proteolytic enzymes within the protease-sensitive hinge region of the C-terminal domain; endostatin inhibits endothelial cell migration in vitro and appears to be highly effective in murine in vivo studies
:
Pssm-ID: 238151 Cd Length: 171 Bit Score: 359.34 E-value: 3.75e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1340 QPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEAL 1419
Cdd:cd00247 1 QPVLHLVALNTPLSGDMRGIRGADFQCFQQARAAGLKGTFRAFLSSRLQDLYSIVRRADRDSLPIVNLKGEVLFNSWESL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1420 FSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCH 1499
Cdd:cd00247 81 FSGSGGQFNPGARIYSFDGRDVLTDPAWPQKMVWHGSDPNGRRLTDSYCEAWRTGDSAVTGQASSLSSGKLLEQKAYSCE 160
|
170
....*....|.
gi 110611235 1500 HAYIVLCIENS 1510
Cdd:cd00247 161 NKLIVLCIENS 171
|
|
| DUF959 super family |
cl25749 |
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' ... |
23-194 |
1.93e-51 |
|
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' isoform of Collagen A.
The actual alignment was detected with superfamily member pfam06121:
Pssm-ID: 399255 [Multi-domain] Cd Length: 192 Bit Score: 180.03 E-value: 1.93e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 23 ANLLNLNWLWFNnEDTSHAATTIPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQD-TPTS----- 96
Cdd:pfam06121 11 AHILGLDLLWFL-DIADPEDTLASEPQGGLAVQPAAAPATHVAPQDDPAEQATAAASPELPLEELEAAPGrAPGApisaa 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 97 -----AESPDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPS 171
Cdd:pfam06121 90 apaalAARPDMREENVAGVGAKILNIAQGIQSFIQLWNDAAPTESPAGAGTLAASAPTDPLALAEPSGPAAESGTALGPH 169
|
170 180
....*....|....*....|...
gi 110611235 172 RGIPSSPGAHTTEAGTLPAPTPS 194
Cdd:pfam06121 170 RGALSSLDTPRAESGTLAVPTQL 192
|
|
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
221-409 |
4.93e-42 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
:
Pssm-ID: 214560 Cd Length: 184 Bit Score: 152.51 E-value: 4.93e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 221 EVGLLQLLGDPP-PQQVTQTDDPDVG-LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDsAQAM 298
Cdd:smart00210 1 GQDLLQVFDLPSlSFAIRQVVGPEPGsPAYRLGDPALVPQPTRDLFPSGLPEDFSLLTTFRQTPKSRGVLFAIYD-AQNV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 299 VLLGVKLsgvqDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELe 378
Cdd:smart00210 80 RQFGLEV----DGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGQPPID- 154
|
170 180 190
....*....|....*....|....*....|.
gi 110611235 379 pGAGLFVAQAGGADPDKFQGVIAELKVRRDP 409
Cdd:smart00210 155 -TDGIEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
821-1011 |
3.49e-19 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 92.28 E-value: 3.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 821 KGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVyvseqdg 900
Cdd:NF038329 137 RGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPA------- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 901 svlSVPGPEGRPGFAGFPGPAGPKGNL-----GSKGERGSPGPKGEKGEPGSIfSPDGGALGPAQKGAKGEPGFRGPPGP 975
Cdd:NF038329 210 ---GPAGPDGEAGPAGEDGPAGPAGDGqqgpdGDPGPTGEDGPQGPDGPAGKD-GPRGDRGEAGPDGPDGKDGERGPVGP 285
|
170 180 190
....*....|....*....|....*....|....*.
gi 110611235 976 YGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASL 1011
Cdd:NF038329 286 AGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQ 321
|
|
| Collagen_trimer |
pfam20010 |
Collagen trimerization domain; This small domain mediate trimerization in various collagen ... |
1207-1255 |
1.15e-18 |
|
Collagen trimerization domain; This small domain mediate trimerization in various collagen proteins.
:
Pssm-ID: 466257 Cd Length: 49 Bit Score: 80.73 E-value: 1.15e-18
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 110611235 1207 VRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTP 1255
Cdd:pfam20010 1 VTVFQNYDTMLQKTHRVPEGTLVYVREREELYIRVRNGWRKIQLGELIP 49
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
554-874 |
3.33e-07 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 54.53 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 554 PLGPAGPA-LQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVgergppgpqg 632
Cdd:NF038329 124 PAGPAGPAgEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGP---------- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 633 ppgppgpsfrhdkltfidmegsgfggdlealRGPRGFPGPPGPpgvpglpgepgrfgvnssdvPGPAGLPGVPGRegppg 712
Cdd:NF038329 194 -------------------------------QGPRGETGPAGE--------------------QGPAGPAGPDGE----- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 713 fpGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGEsglagapgpagppgppgppgppgpglpagfD 792
Cdd:NF038329 218 --AGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGD------------------------------R 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 793 DMEGSGGPfwstarsadgpqgppglPGLKGDPGVPGLPGAKGEVGADGVP---------GFPGLPGREGIAGPQGPKGDR 863
Cdd:NF038329 266 GEAGPDGP-----------------DGKDGERGPVGPAGKDGQNGKDGLPgkdgkdgqnGKDGLPGKDGKDGQPGKDGLP 328
|
330
....*....|.
gi 110611235 864 GSRGEKGDPGK 874
Cdd:NF038329 329 GKDGKDGQPGK 339
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
478-621 |
4.19e-03 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 41.43 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 478 EVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEG-----GLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPV 552
Cdd:NF038329 142 ETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGeagakGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPA 221
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110611235 553 SPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPG 621
Cdd:NF038329 222 GEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDG 290
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Endostatin-like |
cd00247 |
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of ... |
1340-1510 |
3.75e-115 |
|
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of collagen XV/XVIII, a proteoglycan/collagen found in vessel walls and basement membranes; this domain has a compact globular fold similar to that of C-type lectins; endostatin XVIII is monomeric and contains a heparin-binding epitope and zinc binding sites while endostatin XV is trimeric and contains neither of these sites; the generation of endostatin or endostatin-like collagen XV/XVIII fragments is catalyzed by proteolytic enzymes within the protease-sensitive hinge region of the C-terminal domain; endostatin inhibits endothelial cell migration in vitro and appears to be highly effective in murine in vivo studies
Pssm-ID: 238151 Cd Length: 171 Bit Score: 359.34 E-value: 3.75e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1340 QPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEAL 1419
Cdd:cd00247 1 QPVLHLVALNTPLSGDMRGIRGADFQCFQQARAAGLKGTFRAFLSSRLQDLYSIVRRADRDSLPIVNLKGEVLFNSWESL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1420 FSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCH 1499
Cdd:cd00247 81 FSGSGGQFNPGARIYSFDGRDVLTDPAWPQKMVWHGSDPNGRRLTDSYCEAWRTGDSAVTGQASSLSSGKLLEQKAYSCE 160
|
170
....*....|.
gi 110611235 1500 HAYIVLCIENS 1510
Cdd:cd00247 161 NKLIVLCIENS 171
|
|
| Endostatin |
pfam06482 |
Collagenase NC10 and Endostatin; NC10 stands for Non-helical region 10 and is taken from Swiss: ... |
1343-1511 |
2.80e-113 |
|
Collagenase NC10 and Endostatin; NC10 stands for Non-helical region 10 and is taken from Swiss:P39059. A mutation in this region in Swiss:P39060 is associated with an increased risk of prostrate cancer. This domain is cleaved from the precursor and forms endostatin. Endostatin is a key tumour suppressor and has been used highly successfully to treat cancer. It is a potent angiogenesis inhibitor. Endostatin also binds a zinc ion near the N-terminus; this is likely to be of structural rather than functional importance according to.
Pssm-ID: 461931 Cd Length: 169 Bit Score: 354.06 E-value: 2.80e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1343 LHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSG 1422
Cdd:pfam06482 1 LHLIALNTPQSGDMRGIRGADFLCFQQARAAGLKGTFRAFLSSRLQDLYSIVRKADRENVPIVNLKDEVLFDSWESIFSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1423 SEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAY 1502
Cdd:pfam06482 81 SGGQMKPNVPIYSFDGRDVLRDPAWPQKMVWHGSTSKGHRLTDNYCEAWRTGDQAVTGQASSLQSGKLLQQSPSSCSNSY 160
|
....*....
gi 110611235 1503 IVLCIENSF 1511
Cdd:pfam06482 161 IVLCIENSY 169
|
|
| DUF959 |
pfam06121 |
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' ... |
23-194 |
1.93e-51 |
|
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' isoform of Collagen A.
Pssm-ID: 399255 [Multi-domain] Cd Length: 192 Bit Score: 180.03 E-value: 1.93e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 23 ANLLNLNWLWFNnEDTSHAATTIPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQD-TPTS----- 96
Cdd:pfam06121 11 AHILGLDLLWFL-DIADPEDTLASEPQGGLAVQPAAAPATHVAPQDDPAEQATAAASPELPLEELEAAPGrAPGApisaa 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 97 -----AESPDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPS 171
Cdd:pfam06121 90 apaalAARPDMREENVAGVGAKILNIAQGIQSFIQLWNDAAPTESPAGAGTLAASAPTDPLALAEPSGPAAESGTALGPH 169
|
170 180
....*....|....*....|...
gi 110611235 172 RGIPSSPGAHTTEAGTLPAPTPS 194
Cdd:pfam06121 170 RGALSSLDTPRAESGTLAVPTQL 192
|
|
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
221-409 |
4.93e-42 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 152.51 E-value: 4.93e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 221 EVGLLQLLGDPP-PQQVTQTDDPDVG-LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDsAQAM 298
Cdd:smart00210 1 GQDLLQVFDLPSlSFAIRQVVGPEPGsPAYRLGDPALVPQPTRDLFPSGLPEDFSLLTTFRQTPKSRGVLFAIYD-AQNV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 299 VLLGVKLsgvqDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELe 378
Cdd:smart00210 80 RQFGLEV----DGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGQPPID- 154
|
170 180 190
....*....|....*....|....*....|.
gi 110611235 379 pGAGLFVAQAGGADPDKFQGVIAELKVRRDP 409
Cdd:smart00210 155 -TDGIEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
821-1011 |
3.49e-19 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 92.28 E-value: 3.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 821 KGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVyvseqdg 900
Cdd:NF038329 137 RGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPA------- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 901 svlSVPGPEGRPGFAGFPGPAGPKGNL-----GSKGERGSPGPKGEKGEPGSIfSPDGGALGPAQKGAKGEPGFRGPPGP 975
Cdd:NF038329 210 ---GPAGPDGEAGPAGEDGPAGPAGDGqqgpdGDPGPTGEDGPQGPDGPAGKD-GPRGDRGEAGPDGPDGKDGERGPVGP 285
|
170 180 190
....*....|....*....|....*....|....*.
gi 110611235 976 YGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASL 1011
Cdd:NF038329 286 AGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQ 321
|
|
| Collagen_trimer |
pfam20010 |
Collagen trimerization domain; This small domain mediate trimerization in various collagen ... |
1207-1255 |
1.15e-18 |
|
Collagen trimerization domain; This small domain mediate trimerization in various collagen proteins.
Pssm-ID: 466257 Cd Length: 49 Bit Score: 80.73 E-value: 1.15e-18
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 110611235 1207 VRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTP 1255
Cdd:pfam20010 1 VTVFQNYDTMLQKTHRVPEGTLVYVREREELYIRVRNGWRKIQLGELIP 49
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
696-946 |
1.10e-16 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 84.57 E-value: 1.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 696 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAgppg 775
Cdd:NF038329 134 QGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPA---- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 776 ppgppgppgpglpagfddmeGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAG 855
Cdd:NF038329 210 --------------------GPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 856 PQGPKGDRGSRGEKGDPGKDGvgqpglpgppgppgpvvyvseQDGSVlSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS 935
Cdd:NF038329 270 PDGPDGKDGERGPVGPAGKDG---------------------QNGKD-GLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGL 327
|
250
....*....|.
gi 110611235 936 PGPKGEKGEPG 946
Cdd:NF038329 328 PGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
724-1007 |
2.37e-16 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 83.42 E-value: 2.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 724 GREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESglagapgpagppgppgppgppgpglpagfddmegsgGPfws 803
Cdd:NF038329 132 GEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEA------------------------------------GP--- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 804 tarsadgpqgppglpglKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLP 883
Cdd:NF038329 173 -----------------QGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQ 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 884 GPPGPpgpvvyvseqdgsvlsvPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGsifsPDGGALGPAQKGA 963
Cdd:NF038329 236 GPDGD-----------------PGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERG----PVGPAGKDGQNGK 294
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 110611235 964 KGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPG 1007
Cdd:NF038329 295 DGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
839-1099 |
1.45e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.31 E-value: 1.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 839 DGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGqpglpgppgppgpvvyvseqdgsvlsvpGPEGRPGFAGFP 918
Cdd:NF038329 116 DGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQ----------------------------GERGEKGPAGPQ 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 919 GPAGPKGNLGSKGERGSPGPKGEKGEPGsifspdggalgpaqkgAKGEPGfrgppgpygrpgYKGEIGFPGRPGRPGMNG 998
Cdd:NF038329 168 GEAGPQGPAGKDGEAGAKGPAGEKGPQG----------------PRGETG------------PAGEQGPAGPAGPDGEAG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 999 LKGEKGEPGdaslgfgmrgmpgppgppgppgppgtpvydsnvfaessrPGPPGLPGNQGPPGPKGAKGEVGPPGppgqfp 1078
Cdd:NF038329 220 PAGEDGPAG---------------------------------------PAGDGQQGPDGDPGPTGEDGPQGPDG------ 254
|
250 260
....*....|....*....|.
gi 110611235 1079 fdflqlEAEMKGEKGDRGDAG 1099
Cdd:NF038329 255 ------PAGKDGPRGDRGEAG 269
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
554-874 |
3.33e-07 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 54.53 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 554 PLGPAGPA-LQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVgergppgpqg 632
Cdd:NF038329 124 PAGPAGPAgEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGP---------- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 633 ppgppgpsfrhdkltfidmegsgfggdlealRGPRGFPGPPGPpgvpglpgepgrfgvnssdvPGPAGLPGVPGRegppg 712
Cdd:NF038329 194 -------------------------------QGPRGETGPAGE--------------------QGPAGPAGPDGE----- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 713 fpGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGEsglagapgpagppgppgppgppgpglpagfD 792
Cdd:NF038329 218 --AGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGD------------------------------R 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 793 DMEGSGGPfwstarsadgpqgppglPGLKGDPGVPGLPGAKGEVGADGVP---------GFPGLPGREGIAGPQGPKGDR 863
Cdd:NF038329 266 GEAGPDGP-----------------DGKDGERGPVGPAGKDGQNGKDGLPgkdgkdgqnGKDGLPGKDGKDGQPGKDGLP 328
|
330
....*....|.
gi 110611235 864 GSRGEKGDPGK 874
Cdd:NF038329 329 GKDGKDGQPGK 339
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
822-872 |
1.91e-05 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 43.64 E-value: 1.91e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 110611235 822 GDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDP 872
Cdd:pfam01391 7 GPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPGPP 57
|
|
| Laminin_G_3 |
pfam13385 |
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin ... |
253-405 |
4.56e-05 |
|
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
Pssm-ID: 463865 [Multi-domain] Cd Length: 151 Bit Score: 45.07 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 253 DANSGQVAryhFPSLFF--RDFSLLFHIRP-ATEGPGVLFAITDSAQAMVLlgvklsGVQDGHQDISLLYTEPGAGQTHT 329
Cdd:pfam13385 1 DGGSDYVT---LPDALLptSDFTVSAWVKPdSLPGWARAIISSSGGGGYSL------GLDGDGRLRFAVNGGNGGWDTVT 71
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 110611235 330 AASfrlPAFVGQWTHLALSVAGGFVALYVDCEEFQRmplaRSSRGLELEPGAGLFV--AQAGGADPdkFQGVIAELKV 405
Cdd:pfam13385 72 SGA---SVPLGQWTHVAVTYDGGTLRLYVNGVLVGS----STLTGGPPPGTGGPLYigRSPGGDDY--FNGLIDEVRI 140
|
|
| LamG |
cd00110 |
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ... |
257-405 |
2.96e-04 |
|
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain] Cd Length: 151 Bit Score: 42.79 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 257 GQVARYHFPSLFFRDFSLLFHIRPaTEGPGVLFAITDSAQAMVLLgVKLSgvqDGHqdISLLYtEPGAGQThtaaSFRLP 336
Cdd:cd00110 7 SSYVRLPTLPAPRTRLSISFSFRT-TSPNGLLLYAGSQNGGDFLA-LELE---DGR--LVLRY-DLGSGSL----VLSSK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 337 AFV--GQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEpgAGLFVaqaGGADPDK----------FQGVIAELK 404
Cdd:cd00110 75 TPLndGQWHSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLD--GPLYL---GGLPEDLkspglpvspgFVGCIRDLK 149
|
.
gi 110611235 405 V 405
Cdd:cd00110 150 V 150
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
41-270 |
8.91e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 8.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 41 AATTIPEPQGPL-PVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAESPDAPEENIAGVGAEILNVAK 119
Cdd:PHA03247 2753 GPARPARPPTTAgPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 120 GIRSFVQLWNDTVPTESLARAETLVletPVGPLALAGPSSTPQENGTTLW--PSRGIPSSPGAHTTEAGTLPAPTPSPPs 197
Cdd:PHA03247 2833 SAQPTAPPPPPGPPPPSLPLGGSVA---PGGDVRRRPPSRSPAAKPAAPArpPVRRLARPAVSRSTESFALPPDQPERP- 2908
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 110611235 198 lgrPWAPLTGPSVPPPSSERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFR 270
Cdd:PHA03247 2909 ---PQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFR 2978
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
584-621 |
1.83e-03 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 37.86 E-value: 1.83e-03
10 20 30
....*....|....*....|....*....|....*...
gi 110611235 584 DGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPG 621
Cdd:pfam01391 12 PGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPG 49
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
478-621 |
4.19e-03 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 41.43 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 478 EVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEG-----GLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPV 552
Cdd:NF038329 142 ETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGeagakGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPA 221
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110611235 553 SPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPG 621
Cdd:NF038329 222 GEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDG 290
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Endostatin-like |
cd00247 |
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of ... |
1340-1510 |
3.75e-115 |
|
Endostatin-like domain; the angiogenesis inhibitor endostatin is a C-terminal fragment of collagen XV/XVIII, a proteoglycan/collagen found in vessel walls and basement membranes; this domain has a compact globular fold similar to that of C-type lectins; endostatin XVIII is monomeric and contains a heparin-binding epitope and zinc binding sites while endostatin XV is trimeric and contains neither of these sites; the generation of endostatin or endostatin-like collagen XV/XVIII fragments is catalyzed by proteolytic enzymes within the protease-sensitive hinge region of the C-terminal domain; endostatin inhibits endothelial cell migration in vitro and appears to be highly effective in murine in vivo studies
Pssm-ID: 238151 Cd Length: 171 Bit Score: 359.34 E-value: 3.75e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1340 QPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEAL 1419
Cdd:cd00247 1 QPVLHLVALNTPLSGDMRGIRGADFQCFQQARAAGLKGTFRAFLSSRLQDLYSIVRRADRDSLPIVNLKGEVLFNSWESL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1420 FSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCH 1499
Cdd:cd00247 81 FSGSGGQFNPGARIYSFDGRDVLTDPAWPQKMVWHGSDPNGRRLTDSYCEAWRTGDSAVTGQASSLSSGKLLEQKAYSCE 160
|
170
....*....|.
gi 110611235 1500 HAYIVLCIENS 1510
Cdd:cd00247 161 NKLIVLCIENS 171
|
|
| Endostatin |
pfam06482 |
Collagenase NC10 and Endostatin; NC10 stands for Non-helical region 10 and is taken from Swiss: ... |
1343-1511 |
2.80e-113 |
|
Collagenase NC10 and Endostatin; NC10 stands for Non-helical region 10 and is taken from Swiss:P39059. A mutation in this region in Swiss:P39060 is associated with an increased risk of prostrate cancer. This domain is cleaved from the precursor and forms endostatin. Endostatin is a key tumour suppressor and has been used highly successfully to treat cancer. It is a potent angiogenesis inhibitor. Endostatin also binds a zinc ion near the N-terminus; this is likely to be of structural rather than functional importance according to.
Pssm-ID: 461931 Cd Length: 169 Bit Score: 354.06 E-value: 2.80e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1343 LHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSG 1422
Cdd:pfam06482 1 LHLIALNTPQSGDMRGIRGADFLCFQQARAAGLKGTFRAFLSSRLQDLYSIVRKADRENVPIVNLKDEVLFDSWESIFSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 1423 SEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAY 1502
Cdd:pfam06482 81 SGGQMKPNVPIYSFDGRDVLRDPAWPQKMVWHGSTSKGHRLTDNYCEAWRTGDQAVTGQASSLQSGKLLQQSPSSCSNSY 160
|
....*....
gi 110611235 1503 IVLCIENSF 1511
Cdd:pfam06482 161 IVLCIENSY 169
|
|
| DUF959 |
pfam06121 |
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' ... |
23-194 |
1.93e-51 |
|
Domain of Unknown Function (DUF959); This N-terminal domain is not expressed in the 'Short' isoform of Collagen A.
Pssm-ID: 399255 [Multi-domain] Cd Length: 192 Bit Score: 180.03 E-value: 1.93e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 23 ANLLNLNWLWFNnEDTSHAATTIPEPQGPLPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQD-TPTS----- 96
Cdd:pfam06121 11 AHILGLDLLWFL-DIADPEDTLASEPQGGLAVQPAAAPATHVAPQDDPAEQATAAASPELPLEELEAAPGrAPGApisaa 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 97 -----AESPDAPEENIAGVGAEILNVAKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPS 171
Cdd:pfam06121 90 apaalAARPDMREENVAGVGAKILNIAQGIQSFIQLWNDAAPTESPAGAGTLAASAPTDPLALAEPSGPAAESGTALGPH 169
|
170 180
....*....|....*....|...
gi 110611235 172 RGIPSSPGAHTTEAGTLPAPTPS 194
Cdd:pfam06121 170 RGALSSLDTPRAESGTLAVPTQL 192
|
|
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
221-409 |
4.93e-42 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 152.51 E-value: 4.93e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 221 EVGLLQLLGDPP-PQQVTQTDDPDVG-LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDsAQAM 298
Cdd:smart00210 1 GQDLLQVFDLPSlSFAIRQVVGPEPGsPAYRLGDPALVPQPTRDLFPSGLPEDFSLLTTFRQTPKSRGVLFAIYD-AQNV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 299 VLLGVKLsgvqDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELe 378
Cdd:smart00210 80 RQFGLEV----DGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGQPPID- 154
|
170 180 190
....*....|....*....|....*....|.
gi 110611235 379 pGAGLFVAQAGGADPDKFQGVIAELKVRRDP 409
Cdd:smart00210 155 -TDGIEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
821-1011 |
3.49e-19 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 92.28 E-value: 3.49e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 821 KGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVyvseqdg 900
Cdd:NF038329 137 RGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPA------- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 901 svlSVPGPEGRPGFAGFPGPAGPKGNL-----GSKGERGSPGPKGEKGEPGSIfSPDGGALGPAQKGAKGEPGFRGPPGP 975
Cdd:NF038329 210 ---GPAGPDGEAGPAGEDGPAGPAGDGqqgpdGDPGPTGEDGPQGPDGPAGKD-GPRGDRGEAGPDGPDGKDGERGPVGP 285
|
170 180 190
....*....|....*....|....*....|....*.
gi 110611235 976 YGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASL 1011
Cdd:NF038329 286 AGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQ 321
|
|
| Collagen_trimer |
pfam20010 |
Collagen trimerization domain; This small domain mediate trimerization in various collagen ... |
1207-1255 |
1.15e-18 |
|
Collagen trimerization domain; This small domain mediate trimerization in various collagen proteins.
Pssm-ID: 466257 Cd Length: 49 Bit Score: 80.73 E-value: 1.15e-18
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 110611235 1207 VRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTP 1255
Cdd:pfam20010 1 VTVFQNYDTMLQKTHRVPEGTLVYVREREELYIRVRNGWRKIQLGELIP 49
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
696-946 |
1.10e-16 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 84.57 E-value: 1.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 696 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAgppg 775
Cdd:NF038329 134 QGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPA---- 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 776 ppgppgppgpglpagfddmeGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAG 855
Cdd:NF038329 210 --------------------GPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAG 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 856 PQGPKGDRGSRGEKGDPGKDGvgqpglpgppgppgpvvyvseQDGSVlSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS 935
Cdd:NF038329 270 PDGPDGKDGERGPVGPAGKDG---------------------QNGKD-GLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGL 327
|
250
....*....|.
gi 110611235 936 PGPKGEKGEPG 946
Cdd:NF038329 328 PGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
724-1007 |
2.37e-16 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 83.42 E-value: 2.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 724 GREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESglagapgpagppgppgppgppgpglpagfddmegsgGPfws 803
Cdd:NF038329 132 GEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEA------------------------------------GP--- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 804 tarsadgpqgppglpglKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLP 883
Cdd:NF038329 173 -----------------QGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQ 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 884 GPPGPpgpvvyvseqdgsvlsvPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGsifsPDGGALGPAQKGA 963
Cdd:NF038329 236 GPDGD-----------------PGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERG----PVGPAGKDGQNGK 294
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 110611235 964 KGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPG 1007
Cdd:NF038329 295 DGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
839-1099 |
1.45e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.31 E-value: 1.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 839 DGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGqpglpgppgppgpvvyvseqdgsvlsvpGPEGRPGFAGFP 918
Cdd:NF038329 116 DGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQ----------------------------GERGEKGPAGPQ 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 919 GPAGPKGNLGSKGERGSPGPKGEKGEPGsifspdggalgpaqkgAKGEPGfrgppgpygrpgYKGEIGFPGRPGRPGMNG 998
Cdd:NF038329 168 GEAGPQGPAGKDGEAGAKGPAGEKGPQG----------------PRGETG------------PAGEQGPAGPAGPDGEAG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 999 LKGEKGEPGdaslgfgmrgmpgppgppgppgppgtpvydsnvfaessrPGPPGLPGNQGPPGPKGAKGEVGPPGppgqfp 1078
Cdd:NF038329 220 PAGEDGPAG---------------------------------------PAGDGQQGPDGDPGPTGEDGPQGPDG------ 254
|
250 260
....*....|....*....|.
gi 110611235 1079 fdflqlEAEMKGEKGDRGDAG 1099
Cdd:NF038329 255 ------PAGKDGPRGDRGEAG 269
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
554-874 |
3.33e-07 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 54.53 E-value: 3.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 554 PLGPAGPA-LQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVgergppgpqg 632
Cdd:NF038329 124 PAGPAGPAgEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGP---------- 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 633 ppgppgpsfrhdkltfidmegsgfggdlealRGPRGFPGPPGPpgvpglpgepgrfgvnssdvPGPAGLPGVPGRegppg 712
Cdd:NF038329 194 -------------------------------QGPRGETGPAGE--------------------QGPAGPAGPDGE----- 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 713 fpGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGEsglagapgpagppgppgppgppgpglpagfD 792
Cdd:NF038329 218 --AGPAGEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGD------------------------------R 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 793 DMEGSGGPfwstarsadgpqgppglPGLKGDPGVPGLPGAKGEVGADGVP---------GFPGLPGREGIAGPQGPKGDR 863
Cdd:NF038329 266 GEAGPDGP-----------------DGKDGERGPVGPAGKDGQNGKDGLPgkdgkdgqnGKDGLPGKDGKDGQPGKDGLP 328
|
330
....*....|.
gi 110611235 864 GSRGEKGDPGK 874
Cdd:NF038329 329 GKDGKDGQPGK 339
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
822-872 |
1.91e-05 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 43.64 E-value: 1.91e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 110611235 822 GDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDP 872
Cdd:pfam01391 7 GPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPGPP 57
|
|
| Laminin_G_3 |
pfam13385 |
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin ... |
253-405 |
4.56e-05 |
|
Concanavalin A-like lectin/glucanases superfamily; This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
Pssm-ID: 463865 [Multi-domain] Cd Length: 151 Bit Score: 45.07 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 253 DANSGQVAryhFPSLFF--RDFSLLFHIRP-ATEGPGVLFAITDSAQAMVLlgvklsGVQDGHQDISLLYTEPGAGQTHT 329
Cdd:pfam13385 1 DGGSDYVT---LPDALLptSDFTVSAWVKPdSLPGWARAIISSSGGGGYSL------GLDGDGRLRFAVNGGNGGWDTVT 71
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 110611235 330 AASfrlPAFVGQWTHLALSVAGGFVALYVDCEEFQRmplaRSSRGLELEPGAGLFV--AQAGGADPdkFQGVIAELKV 405
Cdd:pfam13385 72 SGA---SVPLGQWTHVAVTYDGGTLRLYVNGVLVGS----STLTGGPPPGTGGPLYigRSPGGDDY--FNGLIDEVRI 140
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
906-946 |
1.04e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 41.33 E-value: 1.04e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 110611235 906 PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPG 946
Cdd:pfam01391 6 PGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPG 46
|
|
| LamG |
cd00110 |
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have ... |
257-405 |
2.96e-04 |
|
Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of purposes including signal transduction via cell-surface steroid receptors, adhesion, migration and differentiation through mediation of cell adhesion molecules.
Pssm-ID: 238058 [Multi-domain] Cd Length: 151 Bit Score: 42.79 E-value: 2.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 257 GQVARYHFPSLFFRDFSLLFHIRPaTEGPGVLFAITDSAQAMVLLgVKLSgvqDGHqdISLLYtEPGAGQThtaaSFRLP 336
Cdd:cd00110 7 SSYVRLPTLPAPRTRLSISFSFRT-TSPNGLLLYAGSQNGGDFLA-LELE---DGR--LVLRY-DLGSGSL----VLSSK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 337 AFV--GQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEpgAGLFVaqaGGADPDK----------FQGVIAELK 404
Cdd:cd00110 75 TPLndGQWHSVSVERNGRSVTLSVDGERVVESGSPGGSALLNLD--GPLYL---GGLPEDLkspglpvspgFVGCIRDLK 149
|
.
gi 110611235 405 V 405
Cdd:cd00110 150 V 150
|
|
| LamG |
smart00282 |
Laminin G domain; |
273-405 |
5.15e-04 |
|
Laminin G domain;
Pssm-ID: 214598 [Multi-domain] Cd Length: 132 Bit Score: 41.56 E-value: 5.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 273 SLLFHIRPaTEGPGVLFAITDSAQAMVLlGVKLSgvqDGHqdISLLYTEPGagqthTAASFRLPAFV---GQWTHLALSV 349
Cdd:smart00282 1 SISFSFRT-TSPNGLLLYAGSKGGGDYL-ALELR---DGR--LVLRYDLGS-----GPARLTSDPTPlndGQWHRVAVER 68
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 110611235 350 AGGFVALYVDCEEFQRMPLARSSRGLELEpgAGLFVaqaGGADPDK----------FQGVIAELKV 405
Cdd:smart00282 69 NGRSVTLSVDGGNRVSGESPGGLTILNLD--GPLYL---GGLPEDLklpplpvtpgFRGCIRNLKV 129
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
41-270 |
8.91e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 8.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 41 AATTIPEPQGPL-PVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAESPDAPEENIAGVGAEILNVAK 119
Cdd:PHA03247 2753 GPARPARPPTTAgPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPT 2832
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 120 GIRSFVQLWNDTVPTESLARAETLVletPVGPLALAGPSSTPQENGTTLW--PSRGIPSSPGAHTTEAGTLPAPTPSPPs 197
Cdd:PHA03247 2833 SAQPTAPPPPPGPPPPSLPLGGSVA---PGGDVRRRPPSRSPAAKPAAPArpPVRRLARPAVSRSTESFALPPDQPERP- 2908
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 110611235 198 lgrPWAPLTGPSVPPPSSERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFR 270
Cdd:PHA03247 2909 ---PQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFR 2978
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
584-621 |
1.83e-03 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 37.86 E-value: 1.83e-03
10 20 30
....*....|....*....|....*....|....*...
gi 110611235 584 DGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPG 621
Cdd:pfam01391 12 PGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPG 49
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
478-621 |
4.19e-03 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 41.43 E-value: 4.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 110611235 478 EVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEG-----GLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPV 552
Cdd:NF038329 142 ETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGeagakGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPA 221
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 110611235 553 SPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPG 621
Cdd:NF038329 222 GEDGPAGPAGDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDG 290
|
|
| |
