U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM160229v1

Organism name:
Zoysia matrella (Manila grass)
Infraspecific name:
Cultivar: Wakaba
BioSample:
SAMD00041944
BioProject:
PRJDB4210
Submitter:
Lab. of Plant Genomics and Genetics, Department of Plant Genome Research, Kazusa DNA Research Institute
Date:
2016/03/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001602295.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BCLG01
Assembly method:
DISCOVARdenovo v. 51598
Genome coverage:
30x
Sequencing technology:
Illumina HiSeq2000, Illumina MiSeq

IDs: 711801 [UID] 3149618 [GenBank]

See Genome Information for Zoysia matrella

History (Show revision history)

Comment

Global statistics

Total sequence length563,438,595
Total ungapped length556,072,172
Gaps between scaffolds0
Number of scaffolds13,609
Scaffold N50108,897
Scaffold L501,496
Number of contigs41,451
Contig N5024,399
Contig L506,899
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)13,609

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced563,438,59513,609556,072,172108,89727,8420