GSE58999[Accession] - GEO DataSets - NCBI

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Select item 2000589991.

Methylome remodeling in regional breast cancer metastasis [DNA methylation]

(Submitter supplied) Genome-wide DNA methylation profiling of of 44 matched primary breast tumors and metastases. We sought to characterize methylome remodeling during regional metastasis. We profiled the DNA methylome (n=44) and transcriptome (n=36) of matched primary breast tumors and regional metastases.

Organism:: Homo sapiens

Type:: Methylation profiling by genome tiling array

Platform:: GPL13534
88 Samples

Download data: TXT

Series

Accession:: GSE58999

ID:: 200058999

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000135342.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website

Organism:: Homo sapiens

1672 Series
1 Related Platform
117813 Samples

Download data: BPM, CSV, TXT, XLSX

Platform

Accession:: GPL13534

ID:: 100013534

Select item 3014237243.

102_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AZ_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423724

ID:: 301423724

Select item 3014237234.

101_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AZ_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423723

ID:: 301423723

Select item 3014237225.

100_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AO_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423722

ID:: 301423722

Select item 3014237216.

99_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AO_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423721

ID:: 301423721

Select item 3014237207.

98_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AY_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423720

ID:: 301423720

Select item 3014237198.

97_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AY_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423719

ID:: 301423719

Select item 3014237189.

96_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AX_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423718

ID:: 301423718

Select item 30142371710.

95_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AX_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423717

ID:: 301423717

Select item 30142371611.

94_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AW_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423716

ID:: 301423716

Select item 30142371512.

93_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AW_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423715

ID:: 301423715

Select item 30142371413.

92_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AV_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423714

ID:: 301423714

Select item 30142371314.

91_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AV_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423713

ID:: 301423713

Select item 30142371215.

90_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AU_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423712

ID:: 301423712

Select item 30142371116.

89_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AU_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423711

ID:: 301423711

Select item 30142371017.

88_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AT_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423710

ID:: 301423710

Select item 30142370918.

87b_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AT_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423709

ID:: 301423709

Select item 30142370819.

86_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AS_lymph node metastasis

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423708

ID:: 301423708

Select item 30142370720.

85_DNA_methylation

Organism:: Homo sapiens

Source name:: breast tumor tissue_AS_primary tumor

Platform:: GPL13534
Series:: GSE58999 GSE59000

Sample

Accession:: GSM1423707

ID:: 301423707

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