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ICAM5 intercellular adhesion molecule 5 [ Equus caballus (horse) ]

Gene ID: 100146897, updated on 8-Mar-2024

Summary

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Official Symbol
ICAM5provided by VGNC
Official Full Name
intercellular adhesion molecule 5provided by VGNC
Primary source
VGNC:VGNC:58174
See related
Ensembl:ENSECAG00000009299
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (51471648..51478330, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 7 NC_009150.2 (49674860..49681897, complement)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene ribonucleoprotein, PTB binding 1 Neighboring gene ferredoxin 2 Neighboring gene zinc finger GATA like protein 1 Neighboring gene intercellular adhesion molecule 4 Neighboring gene intercellular adhesion molecule 1 Neighboring gene mitochondrial ribosomal protein L4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intercellular adhesion molecule 5
Names
intercellular adhesion molecule 5, telencephalin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    51471648..51478330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023645444.1 → XP_023501212.1  intercellular adhesion molecule 5

    UniProtKB/TrEMBL
    F6XLX8
    Related
    ENSECAP00000007533.2, ENSECAT00000009838.3
    Conserved Domains (6) summary
    cd05755
    Location:120 → 219
    Ig2_ICAM-1_like; Second immunoglobulin (Ig)-like domain of intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar proteins
    smart00409
    Location:416 → 487
    IG; Immunoglobulin
    smart00410
    Location:758 → 830
    IG_like; Immunoglobulin like
    pfam03921
    Location:31 → 103
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    pfam13895
    Location:324 → 404
    Ig_2; Immunoglobulin domain
    cl11960
    Location:687 → 742
    Ig; Immunoglobulin domain
Nucleotide Protein
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