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dhrs1 dehydrogenase/reductase (SDR family) member 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100195825, updated on 8-Mar-2024

Summary

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Gene symbol
dhrs1
Gene description
dehydrogenase/reductase (SDR family) member 1
See related
Ensembl:ENSSSAG00000067779
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See dhrs1 in Genome Data Viewer
Location:
chromosome: ssa03
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa03 NC_059444.1 (36803416..36816990)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa03 NC_027302.1 (35409344..35435246)

Chromosome ssa03 - NC_059444.1Genomic Context describing neighboring genes Neighboring gene apoptotic chromatin condensation inducer 1a Neighboring gene uncharacterized LOC123741634 Neighboring gene uncharacterized LOC123741635 Neighboring gene uncharacterized LOC106600272 Neighboring gene homeobox and leucine zipper protein Homez

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Exploring the transcriptome of Atlantic salmon (Salmo salar) skin, a major defense organ. Micallef G, et al. Mar Biotechnol (NY), 2012 Oct. PMID 22527268
  2. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dehydrogenase/reductase SDR family member 1
Names
dehydrogenase/reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001140854.1 → NP_001134326.1  dehydrogenase/reductase SDR family member 1

    See identical proteins and their annotated locations for NP_001134326.1

    Status: PROVISIONAL

    Source sequence(s)
    BT047273
    UniProtKB/TrEMBL
    B5X8A4
    Related
    ENSSSAP00000082238.1, ENSSSAT00000115968.2
    Conserved Domains (2) summary
    cd09763
    Location:3 → 268
    DHRS1-like_SDR_c; human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs
    PRK08303
    Location:1 → 267
    PRK08303; short chain dehydrogenase; Provisional

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059444.1 Reference Ssal_v3.1

    Range
    36803416..36816990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014191267.2 → XP_014046742.1  dehydrogenase/reductase SDR family member 1 isoform X1

    UniProtKB/TrEMBL
    B5X8A4
    Related
    ENSSSAP00000158345.1, ENSSSAT00000235212.1
    Conserved Domains (2) summary
    cd09763
    Location:3 → 268
    DHRS1-like_SDR_c; human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs
    PRK08303
    Location:1 → 267
    PRK08303; short chain dehydrogenase; Provisional
Nucleotide Protein
Heading Accession and Version

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