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    ICAM5 intercellular adhesion molecule 5 [ Equus caballus (horse) ]

    Gene ID: 100146897, updated on 8-Mar-2024

    Summary

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    Official Symbol
    ICAM5provided by VGNC
    Official Full Name
    intercellular adhesion molecule 5provided by VGNC
    Primary source
    VGNC:VGNC:58174
    See related
    Ensembl:ENSECAG00000009299
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ICAM5 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (51471648..51478330, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 7 NC_009150.2 (49674860..49681897, complement)

    Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene ribonucleoprotein, PTB binding 1 Neighboring gene ferredoxin 2 Neighboring gene zinc finger GATA like protein 1 Neighboring gene intercellular adhesion molecule 4 Neighboring gene intercellular adhesion molecule 1 Neighboring gene mitochondrial ribosomal protein L4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables integrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    intercellular adhesion molecule 5
    Names
    intercellular adhesion molecule 5, telencephalin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009150.3 Reference EquCab3.0 Primary Assembly

      Range
      51471648..51478330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023645444.1 → XP_023501212.1  intercellular adhesion molecule 5

      UniProtKB/TrEMBL
      F6XLX8
      Related
      ENSECAP00000007533.2, ENSECAT00000009838.3
      Conserved Domains (6) summary
      cd05755
      Location:120 → 219
      Ig2_ICAM-1_like; Second immunoglobulin (Ig)-like domain of intercellular cell adhesion molecule-1 (ICAM-1, CD54) and similar proteins
      smart00409
      Location:416 → 487
      IG; Immunoglobulin
      smart00410
      Location:758 → 830
      IG_like; Immunoglobulin like
      pfam03921
      Location:31 → 103
      ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
      pfam13895
      Location:324 → 404
      Ig_2; Immunoglobulin domain
      cl11960
      Location:687 → 742
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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