The productive conformation of arachidonic acid bound to prostaglandin synthase

Science. 2000 Sep 15;289(5486):1933-7. doi: 10.1126/science.289.5486.1933.

Abstract

Prostaglandin H synthase-1 and -2 (PGHS-1 and -2) catalyze the committed step in prostaglandin synthesis and are targets for nonsteroidal anti-inflammatory drugs (NSAIDs) like aspirin. We have determined the structure of PGHS-1 at 3 angstrom resolution with arachidonic acid (AA) bound in a chemically productive conformation. The fatty acid adopts an extended L-shaped conformation that positions the 13proS hydrogen of AA for abstraction by tyrosine-385, the likely radical donor. A space also exists for oxygen addition on the antarafacial surface of the carbon in the 11-position (C-11). While this conformation allows endoperoxide formation between C-11 and C-9, it also implies that a subsequent conformational rearrangement must occur to allow formation of the C-8/C-12 bond and to position C-15 for attack by a second molecule of oxygen.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Arachidonic Acid / chemistry*
  • Arachidonic Acid / metabolism
  • Crystallography, X-Ray
  • Cyclooxygenase 1
  • Isoenzymes / chemistry*
  • Isoenzymes / metabolism
  • Models, Molecular
  • Prostaglandin-Endoperoxide Synthases / chemistry*
  • Prostaglandin-Endoperoxide Synthases / metabolism
  • Protein Binding
  • Protein Conformation

Substances

  • Isoenzymes
  • Arachidonic Acid
  • Cyclooxygenase 1
  • Prostaglandin-Endoperoxide Synthases

Associated data

  • PDB/1DIY