tA single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta

Plant Cell. 2000 Nov;12(11):2033-46. doi: 10.1105/tpc.12.11.2033.

Abstract

The rice blast resistance (R) gene Pi-ta mediates gene-for-gene resistance against strains of the fungus Magnaporthe grisea that express avirulent alleles of AVR-Pita. Using a map-based cloning strategy, we cloned Pi-ta, which is linked to the centromere of chromosome 12. Pi-ta encodes a predicted 928-amino acid cytoplasmic receptor with a centrally localized nucleotide binding site. A single-copy gene, Pi-ta shows low constitutive expression in both resistant and susceptible rice. Susceptible rice varieties contain pi-ta(-) alleles encoding predicted proteins that share a single amino acid difference relative to the Pi-ta resistance protein: serine instead of alanine at position 918. Transient expression in rice cells of a Pi-ta(+) R gene together with AVR-Pita(+) induces a resistance response. No resistance response is induced in transient assays that use a naturally occurring pi-ta(-) allele differing only by the serine at position 918. Rice varieties reported to have the linked Pi-ta(2) gene contain Pi-ta plus at least one other R gene, potentially explaining the broadened resistance spectrum of Pi-ta(2) relative to Pi-ta. Molecular cloning of the AVR-Pita and Pi-ta genes will aid in deployment of R genes for effective genetic control of rice blast disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles*
  • Amino Acid Sequence
  • Amino Acid Substitution*
  • Base Sequence
  • Chromosomes, Artificial, Bacterial
  • Cloning, Molecular
  • DNA Primers
  • Metalloendopeptidases / chemistry*
  • Metalloendopeptidases / genetics
  • Molecular Sequence Data
  • Plant Proteins*

Substances

  • DNA Primers
  • Plant Proteins
  • AVP-Pita protein, Oryza sativa
  • Metalloendopeptidases