Cloning and expression analysis of rainbow trout Oncorhynchus mykiss tumour necrosis factor-alpha

Eur J Biochem. 2001 Mar;268(5):1315-22. doi: 10.1046/j.1432-1327.2001.01996.x.

Abstract

A rainbow trout (Oncorhynchus mykiss) gene for tumor necrosis factor (TNF) has been cloned and sequenced. The cDNA contains an open reading frame of 738 nucleotides that translate into a 246 amino-acid putative peptide, with a 5' untranslated region (UTR) of 140 bp and a 3' UTR of 506 bp. Two potential N-linked glycosylation sites exist in the translation. The genomic sequence measures 2007 bp and contains three introns that intercept four coding exons. Expression studies using RT-PCR have shown that the trout TNF gene is constitutively expressed in the gill and kidney of unstimulated fish. Trout TNF expression could be up-regulated by stimulation of isolated head kidney leucocytes with lipopolysaccharide (LPS). Similarly, stimulation of a trout macrophage cell line (RTS11) with LPS resulted in an increased transcript level, as did incubation with recombinant trout interleukin (IL)-1 beta. The optimal timing for induction of TNF expression in trout macrophages was determined using recombinant trout IL-1 beta, where a clear induction was apparent by 2 h and peaked at 4 h. Evidence that this TNF gene is equivalent to mammalian TNF-alpha is discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cell Line
  • Cloning, Molecular
  • Exons / genetics
  • Gene Expression Profiling
  • Gene Library
  • Gills / metabolism
  • Glycosylation
  • Humans
  • Interleukin-1 / pharmacology
  • Introns / genetics
  • Kidney / cytology
  • Kidney / drug effects
  • Kidney / metabolism
  • Lipopolysaccharides / pharmacology
  • Macrophages / drug effects
  • Macrophages / metabolism
  • Molecular Sequence Data
  • Oncorhynchus / blood
  • Oncorhynchus / genetics*
  • Oncorhynchus / immunology*
  • Open Reading Frames / genetics
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Sequence Alignment
  • Transcriptional Activation* / drug effects
  • Tumor Necrosis Factor-alpha / chemistry
  • Tumor Necrosis Factor-alpha / genetics*

Substances

  • Interleukin-1
  • Lipopolysaccharides
  • RNA, Messenger
  • Tumor Necrosis Factor-alpha

Associated data

  • GENBANK/AJ277604