Capsid size determination in the P2-P4 bacteriophage system: suppression of sir mutations in P2's capsid gene N by supersid mutations in P4's external scaffold gene sid

Virology. 2001 Apr 25;283(1):49-58. doi: 10.1006/viro.2001.0853.

Abstract

The sid gene of the P2-dependent phage P4 provides an external scaffold so P2 N gene encoded protomers assemble as T = 4 capsids rather than as P2's T = 7 capsids. Mutations (sir) in the middle of N interfere with Sid's function. We describe a new P4 mutant class, nms ("supersid") mutations, which direct also P2 sir to provide small capsids. Three different nms mutations were located near the sid end, commingled with sid(-) mutations. Suppression of sir by nms is not allele-specific. Our results favor this interpretation of capsid size control: (i) sir mutations reduce pN protomer flexibility and thereby interfere with the generation of T = 4 compatible hexons; (ii) the C-termini of Sid molecules link up when forming the scaffold; nms mutations strengthen these Sid-Sid contacts and thus allow the scaffold to force even sir-type protomers to form T = 4 compatible hexons. Some related findings concern suppression of N ts mutations by P4.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Bacteriophage P2 / genetics
  • Bacteriophage P2 / growth & development
  • Bacteriophage P2 / metabolism
  • Capsid / genetics*
  • Capsid / metabolism*
  • Capsid Proteins*
  • Coliphages / genetics*
  • Coliphages / growth & development
  • Coliphages / metabolism
  • Escherichia coli / virology
  • Genes, Viral
  • Lysogeny
  • Molecular Sequence Data
  • Mutation*
  • Nucleocapsid Proteins / genetics*
  • Plasmids / genetics
  • Sequence Analysis, DNA
  • Suppression, Genetic
  • Temperature

Substances

  • Capsid Proteins
  • Nucleocapsid Proteins
  • Sid protein, Bacteriophage P4

Associated data

  • GENBANK/AF063097
  • GENBANK/X51522