Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta

Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):439-46. doi: 10.1107/S090744490302938X. Epub 2004 Feb 25.

Abstract

Human tau-protein kinase I (TPK I; also known as glycogen synthase kinase 3 beta; GSK3 beta) is a serine/threonine protein kinase that participates in Alzheimer's disease. Here, binary complex structures of full-length TPK I/GSK3 beta with the ATP analogues ADP and AMPPNP solved by the X-ray diffraction method at 2.1 and 1.8 A resolution, respectively, are reported. TPK I/GSK3 beta is composed of three domains: an N-terminal domain consisting of a closed beta-barrel structure, a C-terminal domain containing a 'kinase fold' structure and a small extra-domain subsequent to the C-terminal domain. The catalytic site is between the two major domains and has an ATP-analogue molecule in its ATP-binding site. The adenine ring is buried in the hydrophobic pocket and interacts specifically with the main-chain atoms of the hinge loop. The overall structure and substrate-binding residues are similar to those observed in other Ser/Thr protein kinases, while Arg141 (which is not conserved among other Ser/Thr protein kinases) is one of the key residues for specific ATP/ADP recognition by TPK I/GSK3 beta. No residues are phosphorylated, while the orientation of the activation loop in TPK I/GSK3 beta is similar to that in phosphorylated CDK2 and ERK2, suggesting that TPK I/GSK3 beta falls into a conformation that enables it to be constitutively active.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Diphosphate* / analogs & derivatives
  • Adenosine Diphosphate* / chemistry
  • Adenosine Diphosphate* / metabolism
  • Adenosine Triphosphate* / chemistry
  • Adenosine Triphosphate* / metabolism
  • Adenylyl Imidodiphosphate* / chemistry
  • Adenylyl Imidodiphosphate* / metabolism
  • Crystallography, X-Ray
  • Glycogen Synthase Kinase 3 beta
  • Glycogen Synthase Kinase 3* / chemistry
  • Glycogen Synthase Kinase 3* / metabolism
  • Humans
  • Magnesium* / chemistry
  • Magnesium* / metabolism
  • Protein Binding / physiology
  • Protein Serine-Threonine Kinases* / chemistry
  • Protein Serine-Threonine Kinases* / metabolism
  • Protein Structure, Tertiary
  • Structural Homology, Protein

Substances

  • Adenylyl Imidodiphosphate
  • Adenosine Diphosphate
  • Adenosine Triphosphate
  • Glycogen Synthase Kinase 3 beta
  • Protein Serine-Threonine Kinases
  • Glycogen Synthase Kinase 3
  • tau-protein kinase
  • Magnesium

Associated data

  • PDB/1J1B
  • PDB/1J1C
  • PDB/R1J1BSF
  • PDB/R1J1CSF