Psychrobacter nivimaris sp. nov., a heterotrophic bacterium attached to organic particles isolated from the South Atlantic (Antarctica)

Syst Appl Microbiol. 2004 Aug;27(4):399-406. doi: 10.1078/0723202041438455.

Abstract

An aggregate-attached bacterium, strain 88/2-7, was isolated from samples of the Southern Ocean and investigated in a polyphasic approach. The novel marine isolate is an aerobic, Gram-negative, oxidase- and catalase-positive, non-motile short rod and grows in form of cream-colored colonies. Growth was observed at 5-35 degrees C. The bacterium tolerated concentrations of 0-13% (w/v) NaCl and utilized a relatively restricted spectrum of carbon sources. The analysis of the fatty acids revealed 18:1 cis 9 (18:1omega9c) as main fatty acid. The G+C content of the DNA was approximately 42 mol%. The sequence of the 16S rDNA assigned strain 88/2-7 to the gamma-subclass of Proteobacteria with a similarity of 99.65% to Psychrobacter proteolyticus (DSM 13887T). A DNA-DNA-hybridization study showed only 26.8% renaturation to the respective strain. Based on the morphological, physiological and molecular properties of the new isolate, the name Psychrobacter nivimaris sp. nov. (type strain 88/2-7T) is proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antarctic Regions
  • Bacterial Adhesion*
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Ribosomal
  • Molecular Sequence Data
  • Moraxellaceae / classification*
  • Moraxellaceae / genetics
  • Moraxellaceae / physiology
  • Nucleic Acid Hybridization
  • Organic Chemicals
  • Particle Size
  • Phylogeny
  • RNA, Ribosomal, 16S
  • Seawater / microbiology*
  • Sequence Analysis, DNA

Substances

  • DNA, Ribosomal
  • Organic Chemicals
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AJ313425