Platelet microbicidal protein 1: structural themes of a multifunctional antimicrobial peptide

Antimicrob Agents Chemother. 2004 Nov;48(11):4395-404. doi: 10.1128/AAC.48.11.4395-4404.2004.

Abstract

Mammalian platelets release platelet microbicidal proteins (PMPs) as components of their antimicrobial armamentarium. The present studies defined the structure of PMP-1 and examined its structure-activity relationships. Amino acid sequencing and mass spectroscopy demonstrated that distinct N-terminal polymorphism variants of PMP-1 isolated from nonstimulated or thrombin-stimulated platelets arise from a single PMP-1 propeptide. Sequence data (NH(2)-[S]D(1)DPKE(5)SEGDL(10)HCVCV(15)KTTSL(20) . . .) enabled cloning of PMP-1 from bone marrow and characterization of its full-length cDNA. PMP-1 is translated as a 106-amino-acid precursor and is processed to yield 73-residue (8,053 Da) and 72-residue (7,951-Da) variants. Searches with the BLAST program and sequence alignments demonstrated the homology of PMP-1 to members of the mammalian platelet factor 4 (PF-4) family of proteins. On the basis of phylogenetic relatedness, congruent sequence motifs, and predicted three-dimensional structures, PMP-1 shares the greatest homology with human PF-4 (hPF-4). By integration of its structural and antimicrobial properties, these results establish the identity of PMP-1 as a novel rabbit analogue of the microbicidal chemokine (kinocidin) hPF-4. These findings advance the hypothesis that stimuli in the setting of infection prompt platelets to release PF-4-class or related kinocidins, which have structures consistent with their likely multiple roles that bridge molecular and cellular mechanisms of antimicrobial host defense.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Anti-Bacterial Agents / chemistry*
  • Anti-Bacterial Agents / pharmacology*
  • Artificial Intelligence
  • Blood Proteins / chemistry*
  • Blood Proteins / pharmacology*
  • Chemical Phenomena
  • Chemistry, Physical
  • Cloning, Molecular
  • DNA, Complementary / biosynthesis
  • DNA, Complementary / genetics
  • Electrochemistry
  • Electrophoresis, Polyacrylamide Gel
  • Humans
  • In Vitro Techniques
  • Kruppel-Like Transcription Factors
  • Mass Spectrometry
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Conformation
  • Rabbits
  • Repressor Proteins / chemistry
  • Repressor Proteins / genetics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Thrombin / pharmacology

Substances

  • Anti-Bacterial Agents
  • Blood Proteins
  • DNA, Complementary
  • Kruppel-Like Transcription Factors
  • Repressor Proteins
  • ZNF85 protein, human
  • platelet microbicidal protein, Oryctolagus cuniculus
  • Thrombin