Isolation of a calmodulin-binding transcription factor from rice (Oryza sativa L.)

J Biol Chem. 2005 Dec 9;280(49):40820-31. doi: 10.1074/jbc.M504616200. Epub 2005 Sep 28.

Abstract

Calmodulin (CaM) regulates diverse cellular functions by modulating the activities of a variety of enzymes and proteins. However, direct modulation of transcription factors by CaM has been poorly understood. In this study, we isolated a putative transcription factor by screening a rice cDNA expression library by using CaM:horse-radish peroxidase as a probe. This factor, which we have designated OsCBT (Oryza sativa CaM-binding transcription factor), has structural features similar to Arabidopsis AtSRs/AtCAMTAs and encodes a 103-kDa protein because it contains a CG-1 homology DNA-binding domain, three ankyrin repeats, a putative transcriptional activation domain, and five putative CaM-binding motifs. By using a gel overlay assay, gel mobility shift assays, and site-directed mutagenesis, we showed that OsCBT has two different types of functional CaM-binding domains, an IQ motif, and a Ca(2+)-dependent motif. To determine the DNA binding specificity of OsCBT, we employed a random binding site selection method. This analysis showed that OsCBT preferentially binds to the sequence 5'-TWCG(C/T)GTKKKKTKCG-3' (W and K represent A or C and T or G, respectively). OsCBT was able to bind this sequence and activate beta-glucuronidase reporter gene expression driven by a minimal promoter containing tandem repeats of these sequences in Arabidopsis leaf protoplasts. Green fluorescent protein fusions of two putative nuclear localization signals of OsCBT, a bipartite and a SV40 type, were predominantly localized in the nucleus. Most interestingly, the transcriptional activation mediated by OsCBT was inhibited by co-transfection with a CaM gene. Taken together, our results suggest that OsCBT is a transcription activator modulated by CaM.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis / genetics
  • Base Sequence
  • Binding Sites
  • Calmodulin / genetics
  • Calmodulin-Binding Proteins / chemistry
  • Calmodulin-Binding Proteins / genetics
  • Calmodulin-Binding Proteins / isolation & purification*
  • Cloning, Molecular
  • DNA, Complementary / genetics
  • DNA, Plant / chemistry
  • DNA, Plant / metabolism
  • Escherichia coli / genetics
  • Gene Deletion
  • Gene Expression
  • Gene Library
  • Glucuronidase / genetics
  • Glutathione Transferase / genetics
  • Green Fluorescent Proteins / genetics
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Oryza / chemistry*
  • Oryza / genetics
  • Promoter Regions, Genetic / genetics
  • Recombinant Fusion Proteins / genetics
  • Sequence Alignment
  • Tandem Repeat Sequences
  • Transcription Factors / chemistry
  • Transcription Factors / genetics
  • Transcription Factors / isolation & purification*
  • Transfection

Substances

  • Calmodulin
  • Calmodulin-Binding Proteins
  • DNA, Complementary
  • DNA, Plant
  • Recombinant Fusion Proteins
  • Transcription Factors
  • Green Fluorescent Proteins
  • Glutathione Transferase
  • Glucuronidase