Synthesis, biological activity, and DNA-damage profile of platinum-threading intercalator conjugates designed to target adenine

J Med Chem. 2006 Jun 1;49(11):3204-14. doi: 10.1021/jm060035v.

Abstract

PT-ACRAMTU {[PtCl(en)(ACRAMTU)](NO3)2, 2; ACRAMTU = 1-[2-(acridin-9-ylamino)ethyl]-1,3-dimethylthiourea, 1, en = ethane-1,2-diamine} is the prototype of a series of DNA-targeted adenine-affinic dual intercalating/platinating agents. Several novel 4,9-disubstituted acridines and the corresponding platinum-acridine conjugates were synthesized. The newly introduced 4-carboxamide side chains contain H-bond donor/acceptor functions designed to promote groove- and sequence-specific platinum binding. In HL-60 (leukemia) and H460 (lung) cancer cells, IC50 values in the micromolar to millimolar range were observed. Several of the intercalators show enhanced cytotoxicity compared to prototype 1, but conjugate 2 appears to be the most potent hybrid agent. Enzymatic digestion assays in conjunction with liquid chromatography-electrospray mass spectrometry analysis indicate that the new conjugates produce PT-ACRAMTU-type DNA damage. Platinum-modified 2'-deoxyguanosine, dG, and several dinucleotide fragments, d(NpN)*, were detected. One of the conjugates showed significantly higher levels of binding to A-containing sites than conjugate 2 (35 +/- 3% vs 24 +/- 3%). Possible structure-activity relationships are discussed.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Acridines / chemical synthesis*
  • Acridines / chemistry
  • Acridines / pharmacology
  • Adenine / chemistry*
  • Cell Line, Tumor
  • Chromatography, High Pressure Liquid
  • DNA / chemistry
  • DNA Adducts / chemistry
  • DNA Damage*
  • Drug Design
  • Drug Screening Assays, Antitumor
  • Humans
  • Hydrogen Bonding
  • Intercalating Agents / chemical synthesis*
  • Intercalating Agents / chemistry
  • Intercalating Agents / pharmacology
  • Models, Molecular
  • Organoplatinum Compounds / chemical synthesis*
  • Organoplatinum Compounds / chemistry
  • Organoplatinum Compounds / pharmacology
  • Spectrometry, Mass, Electrospray Ionization
  • Structure-Activity Relationship
  • Urea / analogs & derivatives
  • Urea / chemistry

Substances

  • 1-(2-(acridin-9-ylamino)ethyl)-1,3-dimethylthiourea
  • Acridines
  • DNA Adducts
  • Intercalating Agents
  • Organoplatinum Compounds
  • Urea
  • DNA
  • calf thymus DNA
  • Adenine