Diverse class 2 integrons in bacteria from beef cattle sources

J Antimicrob Chemother. 2006 Dec;58(6):1133-8. doi: 10.1093/jac/dkl423. Epub 2006 Oct 25.

Abstract

Objectives: The purpose of this study was to determine the diversity of class 2 integrons in bacteria isolated from beef cattle sources.

Methods: The variable regions of a subset of 11 class 2 integron-containing bacteria were analysed by PCR and DNA sequencing for the presence of novel rearrangements.

Results: A total of six different class 2 integron arrays were identified and four of these were fully characterized. Three of the four arrays characterized have been previously described; however the remaining array is unlike previously described class 2 integrons. The novel class 2 integron was found in Providencia stuartii and contains an apparently functional class 2 integrase. Examination of the variable region of the P. stuartii integron identified nine open reading frames, mostly of unknown function, and represents the first report of a class 2 integron without inserted antibiotic resistance gene cassettes.

Conclusions: This study has identified a novel class 2 integron found in P. stuartii that contains an apparently functional naturally occurring class 2 integrase. Further investigation of this novel class 2 integron is required to determine the impact of a functional class 2 integrase upon the evolution of class 2 integrons.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacteria / drug effects
  • Bacteria / genetics*
  • Bacteria / isolation & purification
  • Cattle / microbiology*
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • Drug Resistance, Bacterial / genetics
  • Feces / microbiology*
  • Gene Order
  • Genetic Variation
  • Genome, Bacterial
  • Integrons / genetics*
  • Meat / microbiology*
  • Molecular Sequence Data
  • Open Reading Frames
  • Polymerase Chain Reaction
  • Providencia / drug effects
  • Providencia / genetics*
  • Providencia / isolation & purification
  • Recombination, Genetic
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial

Associated data

  • GENBANK/DQ286457
  • GENBANK/DQ286458
  • GENBANK/DQ286459
  • GENBANK/DQ533990
  • GENBANK/DQ533991