Fluorescent staining of subcellular organelles: ER, Golgi complex, and mitochondria

Curr Protoc Cell Biol. 2001 May:Chapter 4:Unit 4.4. doi: 10.1002/0471143030.cb0404s00.

Abstract

The ability to distinguish and identify specific subcellular compartments is essential to understanding organelle function, biogenesis, and maintenance within cells and to defining protein trafficking pathways. Fluorescent dyes and/or fluorescently labeled lipid derivatives can be used to identify ER, Golgi complex, and mitochondria. Specific conditions for labeling each of these compartments are described.

MeSH terms

  • 4-Chloro-7-nitrobenzofurazan / analogs & derivatives
  • 4-Chloro-7-nitrobenzofurazan / analysis
  • 4-Chloro-7-nitrobenzofurazan / chemistry
  • Animals
  • Carbocyanines / analysis
  • Carbocyanines / chemistry
  • Cells, Cultured / ultrastructure
  • Ceramides / analysis
  • Ceramides / chemistry
  • Coloring Agents / analysis
  • Coloring Agents / chemistry
  • Endoplasmic Reticulum / chemistry
  • Endoplasmic Reticulum / ultrastructure*
  • Fluorescent Dyes / analysis*
  • Fluorescent Dyes / chemistry
  • Golgi Apparatus / chemistry
  • Golgi Apparatus / ultrastructure*
  • Intracellular Membranes / chemistry
  • Intracellular Membranes / ultrastructure
  • Mitochondria / chemistry
  • Mitochondria / ultrastructure*
  • Rhodamines / analysis
  • Rhodamines / chemistry
  • Specimen Handling / methods
  • Sphingosine / analogs & derivatives
  • Sphingosine / analysis
  • Sphingosine / chemistry
  • Staining and Labeling / methods*
  • Tissue Fixation / methods

Substances

  • Carbocyanines
  • Ceramides
  • Coloring Agents
  • Fluorescent Dyes
  • N-(5-(5,7-dimethyl Bodipy)-1-pentanoyl)-erythrosphingosine
  • Rhodamines
  • 3,3'-dihexyl-2,2'-oxacarbocyanine
  • tetramethylrhodamine
  • N-(7-(4-nitrobenzo-2-oxa-1,3-diazole))-6-aminocaproyl sphingosine
  • 4-Chloro-7-nitrobenzofurazan
  • Sphingosine