Was the initiation of translation in early eukaryotes IRES-driven?

Trends Biochem Sci. 2008 Feb;33(2):58-64. doi: 10.1016/j.tibs.2007.11.002. Epub 2008 Jan 31.

Abstract

The initiation of translation in eukaryotes generally involves the recognition of a 'cap' structure at the 5' end of the mRNA. However, for some viral and cellular mRNAs, a cap-independent mechanism occurs through an mRNA structure known as the internal ribosome entry site (IRES). Here, I postulate that the first eukaryotic mRNAs were translated in a cap-independent, IRES-driven manner that was then superseded in evolution by the cap-dependent mechanism, rather than vice versa. This hypothesis is supported by the following observations: (i) IRES-dependent, but not cap-dependent, translation can take place in the absence of not only a cap, but also many initiation factors; (ii) eukaryotic initiation factor 4E (eIF4E) and eIF4G, molecules absolutely required for cap-dependent translation, are among the most recently evolved translation factors; and (iii) functional similarities suggest the evolution of IRESs from spliceosomal introns. Thus, the contemporary cellular IRESs might be relics of the past.

MeSH terms

  • Eukaryotic Cells / physiology*
  • Eukaryotic Initiation Factor-4F / metabolism
  • Gene Expression Regulation
  • Nucleic Acid Conformation*
  • Protein Biosynthesis*
  • RNA Caps
  • RNA, Messenger / chemistry*
  • RNA, Messenger / metabolism
  • Viral Proteins / genetics
  • Viral Proteins / metabolism

Substances

  • Eukaryotic Initiation Factor-4F
  • RNA Caps
  • RNA, Messenger
  • Viral Proteins