Selection on length mutations after frameshift can explain the origin and retention of the AP3/DEF-like paralogues in Impatiens

J Mol Evol. 2008 May;66(5):424-35. doi: 10.1007/s00239-008-9085-5. Epub 2008 Apr 8.

Abstract

Evolution of class B genes through gene duplication has been proposed as an evolutionary mechanism that contributed to the enormous floral diversity. Frameshift mutations are a likely mechanism to explain the divergent C-terminal sequences of MIKC gene subfamilies. So far, the inferences for frameshifts and selective pressures on the C-terminal domain are made for old duplications for which the exact selective pressures are obscured by evolutionary time. This motivated us to study an example of a recent duplication, which allows us to consider in more detail the selective pressures that are involved after duplication. We find that after duplication and frameshift of Impatiens class B genes, the individual codons show no evidence for adaptive selection. It is rather the length of the C-terminal domain that either is strictly conserved or varies strongly. This suggests a role for the length of the C-terminal domain in the retention of duplicated genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Frameshift Mutation
  • Gene Duplication
  • Impatiens / genetics*
  • MADS Domain Proteins / classification
  • MADS Domain Proteins / genetics*
  • Molecular Sequence Data
  • Phylogeny
  • Plant Proteins / classification
  • Plant Proteins / genetics*
  • Selection, Genetic*
  • Sequence Alignment

Substances

  • MADS Domain Proteins
  • Plant Proteins

Associated data

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