Preparation of allosamidin and demethylallosamidin photoaffinity probes and analysis of allosamidin-binding proteins in asthmatic mice

Bioorg Med Chem. 2011 May 15;19(10):3054-9. doi: 10.1016/j.bmc.2011.04.012. Epub 2011 Apr 13.

Abstract

Allosamidins, metabolites of Streptomyces with strong inhibitory activities toward family 18 chitinases, show a variety of biological activities in various organisms. We prepared photoaffinity and biotinylated probes of allosamidin and demethylallosamidin, the N-demethyl derivative that shows much stronger anti-asthmatic activity than allosamidin. Mild acid hydrolysis of allosamidins afforded mono-amine derivatives, which were amidated to prepare probes with a photoactivatable aryl azide and/or biotin moieties. The derivatives with an N-acyl group at C-2 of the D-allosamine residue at the non-reducing end of allosamidins inhibited Trichoderma chitinase as strongly as the original compounds. Since the target of allosamidins in asthma is unclear, photoaffinity probes were used to analyze allosamidin-binding proteins in bronchoalveolar lavage (BAL) fluid in IL-13-induced asthmatic mice. Ym1, a chitinase-like protein, was identified as the main allosamidin-binding protein among proteins whose expression was upregulated by IL-13 in BAL fluid. Binding of allosamidins with Ym1 was confirmed by the experiments with photoaffinity probes and recombinant Ym1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylglucosamine / analogs & derivatives*
  • Acetylglucosamine / isolation & purification
  • Acetylglucosamine / metabolism
  • Acetylglucosamine / therapeutic use
  • Animals
  • Anti-Asthmatic Agents / isolation & purification
  • Anti-Asthmatic Agents / metabolism*
  • Anti-Asthmatic Agents / therapeutic use
  • Asthma / drug therapy*
  • Asthma / metabolism
  • Bronchoalveolar Lavage Fluid / chemistry*
  • Chitinases / antagonists & inhibitors*
  • Enzyme Inhibitors / metabolism*
  • Enzyme Inhibitors / therapeutic use
  • Lectins / metabolism
  • Male
  • Mice
  • Protein Binding
  • Recombinant Proteins / metabolism
  • Streptomyces / chemistry
  • Trisaccharides / isolation & purification
  • Trisaccharides / metabolism*
  • Trisaccharides / therapeutic use
  • beta-N-Acetylhexosaminidases / metabolism

Substances

  • Anti-Asthmatic Agents
  • Enzyme Inhibitors
  • Lectins
  • Recombinant Proteins
  • Trisaccharides
  • allosamidin
  • methyl-N-demethylallosamidin
  • Chitinases
  • Chil3 protein, mouse
  • beta-N-Acetylhexosaminidases
  • Acetylglucosamine