Mutations in the β-subunit of rod phosphodiesterase identified in consanguineous Pakistani families with autosomal recessive retinitis pigmentosa

Mol Vis. 2011:17:1373-80. Epub 2011 May 25.

Abstract

Purpose: This study was designed to identify pathogenic mutations causing autosomal recessive retinitis pigmentosa (RP) in consanguineous Pakistani families.

Methods: Two consanguineous families affected with autosomal recessive RP were identified from the Punjab Province of Pakistan. All affected individuals underwent a thorough ophthalmologic examination. Blood samples were collected, and genomic DNAs were extracted. Exclusion analysis was completed, and two-point LOD scores were calculated. Bidirectional sequencing of the β subunit of phosphodiesterase 6 (PDE6β) was completed.

Results: During exclusion analyses both families localized to chromosome 4p, harboring PDE6β, a gene previously associated with autosomal recessive RP. Sequencing of PDE6β identified missense mutations: c.1655G>A (p.R552Q) and c.1160C>T (p.P387L) in families PKRP161 and PKRP183, respectively. Bioinformatic analyses suggested that both mutations are deleterious for the native three-dimensional structure of the PDE6β protein.

Conclusions: These results strongly suggest that mutations in PDE6β are responsible for the disease phenotype in the consanguineous Pakistani families.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Alleles
  • Animals
  • Asian People / genetics*
  • Base Sequence
  • Chromosomes, Human, Pair 4 / chemistry
  • Chromosomes, Human, Pair 4 / genetics
  • Consanguinity
  • Cyclic Nucleotide Phosphodiesterases, Type 6 / genetics*
  • Eye Proteins / genetics*
  • Female
  • Gene Frequency
  • Genes, Recessive
  • Haplotypes
  • Humans
  • Lod Score
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Mutation, Missense*
  • Pakistan
  • Pedigree
  • Retinal Rod Photoreceptor Cells / pathology*
  • Retinitis Pigmentosa / genetics*
  • Retinitis Pigmentosa / pathology
  • Sequence Homology, Amino Acid

Substances

  • Eye Proteins
  • Cyclic Nucleotide Phosphodiesterases, Type 6
  • PDE6B protein, human