Isotopic profiling of ¹³C-labeled biological samples by two-dimensional heteronuclear J-resolved nuclear magnetic resonance spectroscopy

Anal Biochem. 2012 Aug 15;427(2):158-63. doi: 10.1016/j.ab.2012.05.021. Epub 2012 May 29.

Abstract

The use of two-dimensional heteronuclear J-resolved (2D H-JRES) nuclear magnetic resonance (NMR) spectroscopy for fast and reliable measurement of isotopic patterns from ¹³C-enriched compounds resulting from carbon labeling experiments was evaluated. Its use with biological samples of increasing complexity showed that 2D H-JRES spectroscopy is suitable for high-throughput isotopic profiling of any kind of labeled samples. Moreover, the method enabled accurate quantification of ¹³C enrichments and, thus, can be used for metabolic flux analysis. The excellent trade-off between reduced experimental time and the number of measurable isotopic data makes 2D H-JRES NMR a promising approach for high-throughput flux analysis of samples of intermediate complexity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / analysis*
  • Carbon Isotopes
  • Complex Mixtures / chemistry*
  • Escherichia coli / chemistry*
  • High-Throughput Screening Assays*
  • Nuclear Magnetic Resonance, Biomolecular / methods
  • Trypanosoma brucei brucei / chemistry*

Substances

  • Amino Acids
  • Carbon Isotopes
  • Complex Mixtures