ADAR1 is involved in the regulation of reprogramming human fibroblasts to induced pluripotent stem cells

Stem Cells Dev. 2014 Mar 1;23(5):443-56. doi: 10.1089/scd.2013.0206. Epub 2013 Dec 14.

Abstract

Adenosine-to-inosine (A-to-I) RNA editing is a post-transcriptional, site-specific modification process that is catalyzed by Adenosine Deaminase Acting on RNA (ADAR) gene family members. Since ADARs act on double-stranded RNA, most A-to-I editing occurs within repetitive elements, particularly Alu elements, as the result of the inherent property of these sequences to fold and form double strands. ADAR1-mediated A-to-I RNA editing was recently implicated in the regulation of human embryonic stem cells (hESCs). Spontaneous and neuronal differentiation of hESC was shown to result in a decrease in A-to-I editing levels. Knockdown of ADAR1 in hESCs results in an elevation of the expression of differentiation-related genes. In addition, we found that hESCs over-expressing ADAR1 could not be generated. The current study shows that the editing levels of induced pluripotent stem cells (iPSCs) change throughout reprogramming, from a source cell level to a level similar to that of hESCs. Up- or down-regulation of the ADAR1 level in human foreskin fibroblast (HFF) cells before induction of reprogramming results in varied reprogramming efficiencies. Furthermore, HFF-iPSC early clones derived from source cells in which the ADAR1 level was down-regulated lose their iPSC properties shortly after iPSC colony formation and instead exhibit characteristics of cancer cells. Taken together, our results imply a role for ADAR1 in the regulation of pluripotency induction as well as in the maintenance of early iPSC properties.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Deaminase / biosynthesis*
  • Adenosine Deaminase / genetics
  • Cell Differentiation / genetics*
  • Embryonic Stem Cells*
  • Fibroblasts
  • Gene Expression Regulation
  • Gene Knockdown Techniques
  • Humans
  • Induced Pluripotent Stem Cells*
  • RNA-Binding Proteins

Substances

  • RNA-Binding Proteins
  • ADARB1 protein, human
  • Adenosine Deaminase