Fabrication of Low Noise Borosilicate Glass Nanopores for Single Molecule Sensing

PLoS One. 2016 Jun 10;11(6):e0157399. doi: 10.1371/journal.pone.0157399. eCollection 2016.

Abstract

We show low-cost fabrication and characterization of borosilicate glass nanopores for single molecule sensing. Nanopores with diameters of ~100 nm were fabricated in borosilicate glass capillaries using laser assisted glass puller. We further achieve controlled reduction and nanometer-size control in pore diameter by sculpting them under constant electron beam exposure. We successfully fabricate pore diameters down to 6 nm. We next show electrical characterization and low-noise behavior of these borosilicate nanopores and compare their taper geometries. We show, for the first time, a comprehensive characterization of glass nanopore conductance across six-orders of magnitude (1M-1μM) of salt conditions, highlighting the role of buffer conditions. Finally, we demonstrate single molecule sensing capabilities of these devices with real-time translocation experiments of individual λ-DNA molecules. We observe distinct current blockage signatures of linear as well as folded DNA molecules as they undergo voltage-driven translocation through the glass nanopores. We find increased signal to noise for single molecule detection for higher trans-nanopore driving voltages. We propose these nanopores will expand the realm of applications for nanopore platform.

MeSH terms

  • Bacteriophage lambda / isolation & purification*
  • Biosensing Techniques / instrumentation
  • Boron Compounds / chemistry
  • DNA, Viral / analysis*
  • Electric Conductivity
  • Glass / chemistry*
  • Nanopores / ultrastructure*
  • Nanotechnology / instrumentation*
  • Silicates / chemistry*

Substances

  • Boron Compounds
  • DNA, Viral
  • Silicates

Grants and funding

GVS received startup funds from Raman Research Institute India and Ramalingaswami Fellowship from Department of Biotechnology, India. Raman Research Institute and Department of Biotechnology, India had no role in the study design, data collection and analysis, decision to publish, or preparation of manuscript.