Intracellular and extracellular microRNA: An update on localization and biological role

Prog Histochem Cytochem. 2016 Nov;51(3-4):33-49. doi: 10.1016/j.proghi.2016.06.001. Epub 2016 Jun 25.

Abstract

MicroRNA (miRNA) is a class of small non-coding RNAs which mediate post-transcriptional gene silencing (PTGS) by sequence-specific inhibition of target mRNAs translation and/or lowering their half-lives in the cytoplasm. Together with their binding partners, Argonaute (AGO) proteins, miRNAs form cores of RNA-induced silencing complexes (RISC). Despite a substantial progress in understanding RISC structure, until recently little was known about its localization in the cell. This review is aimed to provide an overview of the emerging picture of miRNA and RISC localization and function both in the intracellular space and outside of the cell. In contrast to the common assumption that PTGS occurs in the cytoplasm, it was found to operate mainly on the membranes of the endoplasmic reticulum (ER). Besides ER membranes miRNAs were found in all main cellular compartments including nucleus, nucleolus and mitochondria where they regulate various processes including transcription, translation, alternative splicing and DNA repair. Moreover, a certain pool of miRNAs may not be associated with RISC and carry completely different functions. Finally, the discovery of cell-free miRNAs in all biological fluids suggests that miRNAs might also act as signaling molecules outside the cell, and may be utilized as biomarkers for a variety of diseases. In this review we discuss miRNA secretion mechanisms and possible pathways of cell-cell communication via miRNA-containing exosomes in vivo.

Keywords: Cancer; Circulating microRNA; Exosomes; Post-transcriptional gene silencing; microRNA biomarkers; microRNA function.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Argonaute Proteins / genetics*
  • Argonaute Proteins / metabolism
  • Cell Communication
  • Cell Nucleus / metabolism
  • Cell Nucleus / ultrastructure
  • Endoplasmic Reticulum / metabolism
  • Endoplasmic Reticulum / ultrastructure
  • Eukaryotic Cells / cytology
  • Eukaryotic Cells / metabolism*
  • Exosomes / metabolism
  • Exosomes / ultrastructure
  • Humans
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Mitochondria / metabolism
  • Mitochondria / ultrastructure
  • Protein Biosynthesis
  • RNA Interference*
  • RNA, Messenger / genetics*
  • RNA, Messenger / metabolism
  • RNA-Induced Silencing Complex / chemistry
  • RNA-Induced Silencing Complex / genetics*
  • RNA-Induced Silencing Complex / metabolism
  • Signal Transduction
  • Transcription, Genetic

Substances

  • Argonaute Proteins
  • MicroRNAs
  • RNA, Messenger
  • RNA-Induced Silencing Complex