Virtual Screening of DrugBank Reveals Two Drugs as New BCRP Inhibitors

SLAS Discov. 2017 Jan;22(1):86-93. doi: 10.1177/1087057116657513. Epub 2016 Jul 11.

Abstract

The breast cancer resistance protein (BCRP) is an ABC transporter playing a crucial role in the pharmacokinetics of drugs. The early identification of substrates and inhibitors of this efflux transporter can help to prevent or foresee drug-drug interactions. In this work, we built a ligand-based in silico classification model to predict the inhibitory potential of drugs toward BCRP. The model was applied as a virtual screening technique to identify potential inhibitors among the small-molecules subset of DrugBank. Ten compounds were selected and tested for their capacity to inhibit mitoxantrone efflux in BCRP-expressing PLB985 cells. Results identified cisapride (IC50 = 0.4 µM) and roflumilast (IC50 = 0.9 µM) as two new BCRP inhibitors. The in silico strategy proved useful to prefilter potential drug-drug interaction perpetrators among a database of small molecules and can reduce the amount of compounds to test.

Keywords: BCRP inhibition; cisapride; logistic regression; roflumilast; virtual screening.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily G, Member 2 / antagonists & inhibitors*
  • ATP Binding Cassette Transporter, Subfamily G, Member 2 / metabolism
  • Aminopyridines / chemistry
  • Aminopyridines / pharmacology
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology
  • Benzamides / chemistry
  • Benzamides / pharmacology
  • Cell Line, Tumor
  • Cisapride / chemistry
  • Cisapride / pharmacology
  • Cyclopropanes / chemistry
  • Cyclopropanes / pharmacology
  • Drug Evaluation, Preclinical*
  • Humans
  • Inhibitory Concentration 50
  • Logistic Models
  • Neoplasm Proteins / antagonists & inhibitors*
  • Neoplasm Proteins / metabolism
  • Probability
  • ROC Curve
  • Reproducibility of Results
  • User-Computer Interface*

Substances

  • ABCG2 protein, human
  • ATP Binding Cassette Transporter, Subfamily G, Member 2
  • Aminopyridines
  • Antineoplastic Agents
  • Benzamides
  • Cyclopropanes
  • Neoplasm Proteins
  • Roflumilast
  • Cisapride