Usefulness of in-house real time PCR for HBV DNA quantification in serum and oral fluid samples

J Virol Methods. 2018 Jun:256:100-106. doi: 10.1016/j.jviromet.2018.03.001. Epub 2018 Mar 4.

Abstract

For quantification of hepatitis B virus DNA (HBV DNA), commercial assays are used with serum or plasma samples, but oral fluid samples could be an alternative for HBV diagnosis due to ease of collection. This study aims to develop in-house real time PCR using synthetic curve for HBV DNA quantification for serum and oral fluid samples. Samples were collected from 103 individuals (55 HBsAg reactive and HBV DNA reactive by commercial assay and 48 without HBV markers) and submitted to two in-house real time PCR assays for HBV pre-S/S region with different standard curves: qPCR plasmidial and qPCR synthetic. A total of 27 serum samples were HBV DNA positive by qPCR plasmidial and 40 with qPCR synthetic (72% and 85% of concordance, respectively). Quantitative PCR synthetic presented efficiency of 99% and sensitivity of 2log10 copies/mL. Among oral fluid samples, five and ten were detected using qPCR plasmidial and synthetic, respectively. This study demonstrated that qPCR synthetic using serum samples could be used as alternative for HBV DNA quantification due to its sensitivity. In addition, it was possible to quantify HBV DNA in oral fluid samples suggesting the potential of this specimen for molecular diagnosis of HBV.

Keywords: HBV DNA quantification; In-house real time PCR; Oral fluid; Synthetic curve.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cross Reactions
  • DNA, Viral*
  • Hepatitis B / immunology
  • Hepatitis B / virology*
  • Hepatitis B Surface Antigens / immunology
  • Hepatitis B virus / genetics*
  • Hepatitis B virus / immunology
  • Humans
  • Real-Time Polymerase Chain Reaction*
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Viral Load

Substances

  • DNA, Viral
  • Hepatitis B Surface Antigens