The kinetoplastid-infecting Bodo saltans virus (BsV), a window into the most abundant giant viruses in the sea

Elife. 2018 Mar 27:7:e33014. doi: 10.7554/eLife.33014.

Abstract

Giant viruses are ecologically important players in aquatic ecosystems that have challenged concepts of what constitutes a virus. Herein, we present the giant Bodo saltans virus (BsV), the first characterized representative of the most abundant group of giant viruses in ocean metagenomes, and the first isolate of a klosneuvirus, a subgroup of the Mimiviridae proposed from metagenomic data. BsV infects an ecologically important microzooplankton, the kinetoplastid Bodo saltans. Its 1.39 Mb genome encodes 1227 predicted ORFs, including a complex replication machinery. Yet, much of its translational apparatus has been lost, including all tRNAs. Essential genes are invaded by homing endonuclease-encoding self-splicing introns that may defend against competing viruses. Putative anti-host factors show extensive gene duplication via a genomic accordion indicating an ongoing evolutionary arms race and highlighting the rapid evolution and genomic plasticity that has led to genome gigantism and the enigma that is giant viruses.

Keywords: Bodo saltans; Bodo saltans virus; Giant Viruses; NCLDV; evolutionary biology; genomics; infectious disease; microbiology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Evolution, Molecular
  • Genes, Viral
  • Genome, Viral
  • Giant Viruses / classification
  • Giant Viruses / genetics
  • Giant Viruses / isolation & purification*
  • Host-Pathogen Interactions
  • Kinetoplastida / virology*
  • Metagenomics
  • Mimiviridae / classification
  • Mimiviridae / genetics
  • Mimiviridae / isolation & purification*
  • Oceans and Seas
  • Open Reading Frames
  • Seawater / virology*

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.