Glycan utilisation system in Bacteroides and Bifidobacteria and their roles in gut stability and health

Appl Microbiol Biotechnol. 2019 Sep;103(18):7287-7315. doi: 10.1007/s00253-019-10012-z. Epub 2019 Jul 22.

Abstract

Gut residential hundred trillion microbial cells are indispensable for maintaining gut homeostasis and impact on host physiology, development and immune systems. Many of them have displayed excellence in utilising dietary- and host-derived complex glycans and are producing useful postbiotics including short-chain fatty acids to primarily fuel different organs of the host. Therefore, employing individual microbiota is nowadays becoming a propitious target in biomedical for improving gut dysbiosis conditions of the host. Among other gut microbial communities, Bacteroides and Bifidobacteria are coevolved to utilise diverse ranges of diet- and host-derived glycans through harmonising distinct glycan utilisation systems. These gut symbionts frequently share digested oligosaccharides, carbohydrate-active enzymes and fermentable intermediate molecules for sustaining gut microbial symbiosis and improving fitness of own or other communities. Genomics approaches have provided unprecedented insights into these functions, but their precise mechanisms of action have poorly known. Sympathetic glycan-utilising strategy of each gut commensal will provide overview of mechanistic dynamic nature of the gut environment and will then assist in applying aptly personalised nutritional therapy. Thus, the review critically summarises cutting edge understanding of major plant- and host-derived glycan-utilising systems of Bacteroides and Bifidobacteria. Their evolutionary adaptation to gut environment and roles of postbiotics in human health are also highlighted.

Keywords: Bacteroides; Bifidobacteria; Cross-feeding; Glycan recognising; Glycan utilising; Nutritional therapy.

Publication types

  • Review

MeSH terms

  • Bacteroides / genetics
  • Bacteroides / metabolism*
  • Bifidobacterium / genetics
  • Bifidobacterium / metabolism*
  • Diet
  • Gastrointestinal Microbiome*
  • Gastrointestinal Tract / microbiology
  • Gastrointestinal Tract / physiology*
  • Genomics
  • Homeostasis*
  • Humans
  • Polysaccharides / metabolism*
  • Symbiosis

Substances

  • Polysaccharides