Laboratory testing of SARS-CoV, MERS-CoV, and SARS-CoV-2 (2019-nCoV): Current status, challenges, and countermeasures

Rev Med Virol. 2020 May;30(3):e2106. doi: 10.1002/rmv.2106. Epub 2020 Apr 17.

Abstract

Emerging and reemerging infectious diseases are global public concerns. With the outbreak of unknown pneumonia in Wuhan, China in December 2019, a new coronavirus, SARS-CoV-2 has been attracting tremendous attention. Rapid and accurate laboratory testing of SARS-CoV-2 is essential for early discovery, early reporting, early quarantine, early treatment, and cutting off epidemic transmission. The genome structure, transmission, and pathogenesis of SARS-CoV-2 are basically similar to SARS-CoV and MERS-CoV, the other two beta-CoVs of medical importance. During the SARS-CoV and MERS-CoV epidemics, a variety of molecular and serological diagnostic assays were established and should be referred to for SARS-CoV-2. In this review, by summarizing the articles and guidelines about specimen collection, nucleic acid tests (NAT) and serological tests for SARS-CoV, MERS-CoV, and SARS-CoV-2, several suggestions are put forward to improve the laboratory testing of SARS-CoV-2. In summary, for NAT: collecting stool and blood samples at later periods of illness to improve the positive rate if lower respiratory tract specimens are unavailable; increasing template volume to raise the sensitivity of detection; putting samples in reagents containing guanidine salt to inactivate virus as well as protect RNA; setting proper positive, negative and inhibition controls to ensure high-quality results; simultaneously amplifying human RNase P gene to avoid false-negative results. For antibody test, diverse assays targeting different antigens, and collecting paired samples are needed.

Keywords: MERS-CoV; SARS-CoV; SARS-CoV-2 (2019-nCoV); nucleic acid testing; serological testing; specimen collection.

Publication types

  • Review

MeSH terms

  • Antibodies, Viral / isolation & purification
  • Betacoronavirus / genetics
  • Betacoronavirus / isolation & purification
  • COVID-19 Testing
  • Clinical Laboratory Techniques / methods*
  • Communicable Diseases, Emerging / diagnosis
  • Communicable Diseases, Emerging / virology*
  • Coronavirus Infections / diagnosis
  • DNA Primers
  • Humans
  • Middle East Respiratory Syndrome Coronavirus / genetics
  • Middle East Respiratory Syndrome Coronavirus / isolation & purification
  • Real-Time Polymerase Chain Reaction / methods
  • Ribonuclease P / genetics
  • Ribonuclease P / isolation & purification
  • SARS-CoV-2
  • Serologic Tests / methods
  • Severe acute respiratory syndrome-related coronavirus / genetics
  • Severe acute respiratory syndrome-related coronavirus / isolation & purification

Substances

  • Antibodies, Viral
  • DNA Primers
  • Ribonuclease P