Smartphone-based multiplex 30-minute nucleic acid test of live virus from nasal swab extract

Lab Chip. 2020 May 5;20(9):1621-1627. doi: 10.1039/d0lc00304b.

Abstract

Rapid, sensitive and specific detection and reporting of infectious pathogens is important for patient management and epidemic surveillance. We demonstrated a point-of-care system integrated with a smartphone for detecting live virus from nasal swab media, using a panel of equine respiratory infectious diseases as a model system for corresponding human diseases such as COVID-19. Specific nucleic acid sequences of five pathogens were amplified by loop-mediated isothermal amplification on a microfluidic chip and detected at the end of reactions by the smartphone. Pathogen-spiked horse nasal swab samples were correctly diagnosed using our system, with a limit of detection comparable to that of the traditional lab-based test, polymerase chain reaction, with results achieved in ∼30 minutes.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Betacoronavirus / isolation & purification
  • COVID-19 Testing
  • Clinical Laboratory Techniques / methods
  • Coronavirus Infections / diagnosis
  • Herpesvirus 1, Equid / isolation & purification
  • Herpesvirus 4, Equid / isolation & purification
  • Horse Diseases / diagnosis*
  • Horse Diseases / microbiology
  • Horse Diseases / virology
  • Horses
  • Influenza A Virus, H3N8 Subtype / isolation & purification
  • Lab-On-A-Chip Devices*
  • Mobile Applications
  • Molecular Diagnostic Techniques / methods*
  • Nose / microbiology
  • Nose / virology
  • Nucleic Acid Amplification Techniques / methods*
  • Point-of-Care Systems
  • Respiration Disorders / diagnosis
  • Respiration Disorders / microbiology
  • Respiration Disorders / veterinary*
  • Respiration Disorders / virology
  • SARS-CoV-2
  • Smartphone*
  • Streptococcus equi / isolation & purification

Supplementary concepts

  • LAMP assay