Single-Cell Genomics and Epigenomics: Technologies and Applications in Plants

Trends Plant Sci. 2020 Oct;25(10):1030-1040. doi: 10.1016/j.tplants.2020.04.016. Epub 2020 Jun 9.

Abstract

The development of genomics and epigenomics has allowed rapid advances in our understanding of plant biology. However, conventional bulk analysis dilutes cell-specific information by providing only average information, thereby limiting the resolution of genomic and functional genomic studies. Recent advances in single-cell sequencing technology concerning genomics and epigenomics open new avenues to dissect cell heterogeneity in multiple biological processes. Recent applications of these approaches to plants have provided exciting insights into diverse biological questions. We highlight the methodologies underlying the current techniques of single-cell genomics and epigenomics before covering their recent applications, potential significance, and future perspectives in plant biology.

Keywords: epigenomic information; genomic variations; single-cell sequencing; whole genome amplification.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Epigenomics*
  • Genome
  • Genomics*
  • Plants / genetics