BamA forms a translocation channel for polypeptide export across the bacterial outer membrane

Mol Cell. 2021 May 6;81(9):2000-2012.e3. doi: 10.1016/j.molcel.2021.02.023. Epub 2021 Mar 10.

Abstract

The β-barrel assembly machine (BAM) integrates β-barrel proteins into the outer membrane (OM) of Gram-negative bacteria. An essential BAM subunit (BamA) catalyzes integration by promoting the formation of a hybrid-barrel intermediate state between its own β-barrel domain and that of its client proteins. Here we show that in addition to catalyzing the integration of β-barrel proteins, BamA functions as a polypeptide export channel. In vivo structural mapping via intermolecular disulfide crosslinking showed that the extracellular "passenger" domain of a member of the "autotransporter" superfamily of virulence factors traverses the OM through the BamA β-barrel lumen. Furthermore, we demonstrate that a highly conserved residue within autotransporter β-barrels is required to position the passenger inside BamA to initiate translocation and that during translocation, the passenger stabilizes the hybrid-barrel state. Our results not only establish a new function for BamA but also unify the divergent functions of BamA and other "Omp85" superfamily transporters.

Keywords: BAM; BamA; Omp85 superfamily; autotransporter; outer membrane protein; protein folding; secretion.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Bacterial Outer Membrane / metabolism*
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism*
  • Biological Transport
  • Conserved Sequence
  • Escherichia coli K12 / genetics
  • Escherichia coli K12 / metabolism*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Protein Conformation
  • Protein Folding
  • Structure-Activity Relationship
  • Tryptophan

Substances

  • Bacterial Outer Membrane Proteins
  • BamA protein, E coli
  • Escherichia coli Proteins
  • Tryptophan