Astacins, serralysins, snake venom and matrix metalloproteinases exhibit identical zinc-binding environments (HEXXHXXGXXH and Met-turn) and topologies and should be grouped into a common family, the 'metzincins'

FEBS Lett. 1993 Sep 27;331(1-2):134-40. doi: 10.1016/0014-5793(93)80312-i.

Abstract

The X-ray crystal structures of two zinc endopeptidases, astacin from crayfish, and adamalysin II from snake venom, reveal a strong overall topological equivalence and virtually identical extended HEXXHXXGXXH zinc-binding segments, but in addition a methionine-containing turn of similar conformation (the 'Met-turn'), which forms a hydrophobic basis for the zinc ion and the three liganding histidine residues. These two features are also present in a similar arrangement in the matrix metalloproteinases (matrixins) and in the large bacterial Serratia proteinase-like peptidases (serralysins). We suggest that these four proteinases represent members of distinct subfamilies which can be grouped together in a family, for which we propose the designation, metzincins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Binding Sites
  • Endopeptidases / chemistry*
  • Endopeptidases / classification
  • Extracellular Matrix / enzymology
  • Humans
  • Metalloendopeptidases / chemistry*
  • Metalloendopeptidases / classification
  • Methionine / chemistry*
  • Molecular Sequence Data
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Serratia / enzymology
  • Snake Venoms / chemistry*
  • Snake Venoms / classification
  • Zinc / chemistry*

Substances

  • Snake Venoms
  • Methionine
  • Endopeptidases
  • Metalloendopeptidases
  • astacin
  • Zinc