The role of the 5'-end untranslated region of the mRNA for CspA, the major cold-shock protein of Escherichia coli, in cold-shock adaptation

J Bacteriol. 1996 Aug;178(16):4919-25. doi: 10.1128/jb.178.16.4919-4925.1996.

Abstract

During cellular adaptation to low temperature, Escherichia coli transiently synthesizes the major cold-shock protein CspA. It was found that adaptation to cold shock is blocked when the 143-base sequence of the 5' untranslated region (5' UTR) of the cspA mRNA is overproduced. The overproduction of this UTR at 15 degrees C caused the synthesis of not only CspA but also other cold-shock proteins such as CspB and CsdA to be no longer transient but rather prolonged. In addition, inhibition of both the synthesis of cellular proteins other than cold-shock proteins and cell growth was observed. Interestingly, when CspA was also overproduced together with the 5' UTR, normal cold-shock adaptive response was resumed without a prolonged lag period of cell growth. This indicates that the 5' UTR of the cspA mRNA and its gene product CspA play a critical role in the regulation of the expression of cold-shock genes and cold-shock adaptation. An 11-base common sequence (cold box) was found in the 5' UTRs of cspA, cspB, and csdA mRNAs. Indeed, the 25-base sequence within the 5' UTR of the cspA mRNA containing the cold-box sequence was able to prolong CspA production at 15 degrees C. We propose that a putative repressor binds to the cold-box sequence of the cold-shock mRNAs during the adaptive process and this binding in turn blocks the transcription of the cold-shock genes or destabilizes their mRNAs. CspA appears to promote either directly or indirectly the repressor function.

Publication types

  • Comparative Study
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adaptation, Physiological
  • Bacterial Proteins / biosynthesis
  • Bacterial Proteins / metabolism*
  • Base Sequence
  • Chromosomes, Bacterial
  • Cloning, Molecular
  • Cold Temperature
  • Consensus Sequence
  • DEAD-box RNA Helicases
  • DNA Primers
  • Escherichia coli / genetics
  • Escherichia coli / physiology*
  • Escherichia coli Proteins*
  • Gene Expression
  • Genes, Bacterial
  • Heat-Shock Proteins / metabolism
  • Molecular Sequence Data
  • Plasmids
  • Polymerase Chain Reaction
  • Protein Biosynthesis
  • RNA Helicases*
  • RNA, Messenger / chemistry
  • RNA, Messenger / metabolism
  • Restriction Mapping
  • Sequence Homology, Nucleic Acid
  • Transcription Factors / metabolism*

Substances

  • Bacterial Proteins
  • DNA Primers
  • Escherichia coli Proteins
  • Heat-Shock Proteins
  • RNA, Messenger
  • Transcription Factors
  • cold shock protein CS7.4, Bacteria
  • deaD protein, E coli
  • DEAD-box RNA Helicases
  • RNA Helicases